Schistosoma mansoni: Smp_071570
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Entry
Smp_071570 CDS
T01095
Name
(RefSeq) putative transcription initiation factor brf1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smm03021
]
Smp_071570
Transcription machinery [BR:
smm03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
Smp_071570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
8348817
NCBI-ProteinID:
XP_018648181
UniProt:
G4V9J2
LinkDB
All DBs
Position
1:complement(22870617..22886399)
Genome browser
AA seq
770 aa
AA seq
DB search
MKCKHCGCSNLEEDRARADLICLDCGMVLGENVISSEVEFVETSTGQCAAVGRFVSDESQ
AGNFKESRQATENKARRRIDTICGQLRLGNDTAASAFRYYQSALFRGLTRGRSAFTVAAG
CIYLAARQLRVNLMLLDLSDAVGVNVYVLGRVYADLKKRLNLAIPEMDPCIYIDRFASQL
EFGDKVSTVATTAMRLLQRMKKDWIATGRRPSGLAAAALLVAARIHEFNRTEEDVARIAR
ISQSTARKRLEEFGRTPSSALSIEAFFSVDYTEEQDPPAFVASMKQEDEKIKSMSEGTMA
RITLEISELERRIDSELQKLAGKYTARTISSQLSKIDVGCSKGIHHLLAETDSLKTFELL
NDLQKLPNNSVDCGDTVTTSTTTTTTTTPIAVDNVLNQSKTGQVRGILRDVLDGLIEPEL
LDSCVEDLHILTQHSGTKMCQLLAEAEEHRNSASVSSEQKQIVENADSKPSDVEETSITE
AKSKDSTCLKLPVFISSTTITTKKEDKVEDDDTLYTEDIDDEELDREYLLQPREIMLKAA
IWFKANAEHLELSRKRKLAKLQKQQQEQHEDTKGGPKKRRTVNRNNYTTSMKINRNAFSR
TEDPKPISRKINYEALEAVVGLSTTCPSVDLINNSGKTVSATDVDNVTEPIPGPLLASTL
CDNDNSKDLLKSPKHIRDNNKHKSITSMNLKALSNVNDNDKKAVKDQNLDANNNKLEVEE
EKDNEAEGEEKDEENIDENNMYNSYLPNYSHGIDDDDEDDIDWSTGAELW
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtaaacattgcggttgctctaatttagaggaagatcgtgcacgggctgattta
atatgtctggactgtggaatggtgttgggagagaatgttatttcgtcggaagtagaattt
gtcgaaacgagcactggtcagtgtgctgcagtcggtcgttttgtttcagacgaaagtcag
gcaggaaatttcaaggagtcacgacaggcaacagaaaataaagctcgtcgaaggattgac
actatttgtggccagttacgccttggaaatgacacggctgcatctgccttccgttattat
caaagcgcactttttcgtgggttaacaagaggtcgtagtgcctttacagttgctgcaggt
tgtatttatttagcagctcgtcagttgcgtgtcaatttgatgttactagacctcagcgat
gcagtgggtgttaatgtttacgtccttggccgtgtttatgcagacttgaagaagcgacta
aatctagcaataccagaaatggatccttgtatatatatcgaccgtttcgctagtcagcta
gagtttggagataaggtatcaacagttgctacaactgctatgcgtttactacaaagaatg
aaaaaagattggatcgctactggaagaagacccagtggattggctgcggcagcgctactt
gttgctgctcgtattcatgaattcaatagaacagaagaggacgtagctcgaattgctcga
ataagccaaagtactgctcggaagcgtttagaagaattcggtcgcactccatcatctgct
ctcagcattgaagcatttttttcagttgattatacggaggaacaagacccaccagcattt
gttgcttcaatgaaacaggaagatgagaagataaaaagtatgtcagagggaacgatggct
cgtattactctggaaatatctgaattagaacgtcgtatagatagtgaattacaaaaactg
gccggaaagtatactgcacgtactatttcttcacaactttccaaaatagatgttggttgc
tctaaaggtatacaccatttactagctgagacagattcactcaaaacatttgaactttta
aatgacttacaaaaattacctaataatagtgttgattgtggcgatacagttactactagt
actacaacaacgacaacaacaacacctattgcagttgataatgttttgaatcaatctaaa
actggtcaagttcgtggaatattacgtgatgttttagatggtttaatcgaaccagaattg
ttagatagttgtgttgaagatctacatattttaactcaacattctggtactaaaatgtgt
caacttttggccgaagctgaagagcatagaaattcggcttctgtaagtagtgagcagaaa
caaatagttgaaaatgctgattctaaaccatctgatgttgaagaaacgagtatcactgag
gcgaaatcaaaagattcaacgtgtttgaaactgcccgttttcatttcatcaacaactatt
actacaaagaaagaagataaagtcgaagatgatgatactttgtatactgaagatattgat
gatgaagaattagatcgagagtacttacttcaacccagagaaataatgttaaaggcagct
atttggttcaaagcgaatgcagagcatctggaactgtcaagaaaacgaaaattagctaaa
ttacaaaaacaacaacaagaacaacacgaagataccaaaggtggtcctaaaaagcgtagg
accgtcaatcgtaataactatacaacatcaatgaaaataaatcgtaatgccttttctaga
acagaagatcccaaaccgatatctcgtaaaattaattacgaagcacttgaagcagttgtt
ggcctttcaacaacctgtccatcagttgatttgatcaataatagcggtaaaactgtctcg
gcgactgatgttgacaatgttactgaaccaatacctggtccattacttgcatccacctta
tgcgataatgataattctaaagatttactcaaatcacccaaacatatccgagataacaat
aagcacaagtcaattacatcaatgaatctaaaagctttatccaatgttaatgataatgat
aaaaaggcagtaaaagatcaaaatttggatgctaacaataataagcttgaggttgaagag
gagaaagacaatgaagcagaaggagaagagaaagacgaagaaaacatcgatgaaaacaac
atgtataattcatatttacccaattatagtcatgggatcgatgatgatgatgaagatgat
atagattggtctactggtgctgaattatggtga
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