Schistosoma mansoni: Smp_073830
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Entry
Smp_073830 CDS
T01095
Name
(RefSeq) cleavage and polyadenylation specificity factor,putative
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smm03041
]
Smp_073830
Spliceosome [BR:
smm03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
Smp_073830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Lactamase_B_2
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
8346231
NCBI-ProteinID:
XP_018646862
UniProt:
G4M044
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MSSIRVIPLGAGQDVGRSCILVTLGGKNIMFDCGMHMGYNDDRKFPDFTYITDKGGLNEY
LDCVIISHFHLDHCGALPYMTEVIGYDGPIYMTHPTKAICPILLEDYRKINVERRGDQNF
FTSDMIYRCMTKVRCVYIHQTVKVDDELEIQAFYAGHVLGAAMFLVRVGTNSVLYTGDYN
MTPDRHLGAAWVSRCRPDLLITESTYATTIRDSKRTREREFLEKIHARVEAGGKVLIPVF
ALGRAQELCILLETYWERMNISVPIYFSMGMAEKANEYYKLFISWTNQKIKETFVKRNMF
DFKHIKPLGQGTVDNPGPMVVFATPGMLHAGQSLHIFRKWASDERNMVVIPGYCVAGTVG
YKILNGVRRLEFDKQVLEVKMAVEYLSFSAHADARGIMQLISHCQPKHVMLVHGEAIKMD
FLKSKIEQEFGLPCSKPANGEVVHIKTEQQFIVEASREFLNQSYYSDDPNEPLIKRSRSI
QGGIQIEPDETPKLLDRASVLASLSLKEHVMRFTSTHVFSSSSNLATILDKFVKLCSKLP
IDPPKIVRNQILFNDSVVVSVCDPMLDEFDDETRERSTALRRTANLQSKEFVCHVTYNLQ
NEALGEQLIKMFKEQIVSV
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagttctattcgggtcattcctttgggtgctgggcaagatgttggtaggagttgcatt
cttgtcactctgggtggcaaaaatattatgttcgattgcggaatgcacatgggctataac
gatgacagaaaatttcctgacttcacttacattaccgacaaagggggtctcaatgagtac
ctggattgtgtaattattagtcatttccatctcgaccactgtggagctcttccttatatg
accgaagtaataggctacgatggtccaatctatatgactcatcctaccaaggcaatttgc
ccgatacttttggaagattatcgtaaaatcaatgttgagaggagaggagatcaaaacttt
ttcacttctgatatgatatatcggtgtatgacgaaagttaggtgtgtgtacatacatcaa
acagtcaaagtagatgatgagctcgaaatacaggcattttatgctggccacgttctggga
gcagcaatgtttcttgtacgcgtaggaacaaattctgtcttgtataccggcgattacaac
atgacacccgatagacatcttggtgcagcttgggtttctcgttgtcgtccagatcttctc
attacggaaagcacttacgcaacgacaatacgagattcaaaacgtacaagagaacgggaa
tttttggaaaagatacatgctcgcgttgaggctggcggtaaagtcttgatccctgtcttt
gccttaggtcgagctcaagaactttgtatattgcttgaaacatattgggaaagaatgaat
atttccgtcccaatttacttctccatgggaatggctgaaaaagctaatgagtattacaag
ttgtttatctcgtggactaatcaaaaaatcaaggagacatttgtaaaacgaaatatgttt
gacttcaaacatataaagcctcttgggcaagggacagtcgataatccaggaccaatggta
gtcttcgccacaccaggtatgcttcacgctggacaatctttgcatatatttcgtaaatgg
gcttcagatgaaagaaatatggttgtaattccaggatattgtgttgctgggactgtaggt
tacaagattttaaatggagtcaggcgtcttgaatttgataaacaagttttagaagtgaaa
atggcagttgaatacttatcgttctcagctcatgcagatgctcgtggtattatgcagttg
atatctcattgtcaacctaaacatgtaatgctggtacatggggaagcaattaagatggat
ttcttaaaatcaaaaattgaacaagagtttggattaccctgttcgaaacctgctaatgga
gaggttgtacatataaaaacggaacaacaattcattgtagaagcttcaagagaatttctt
aatcagtcgtattattcagatgatccaaatgagccactgattaaacgttctcgatctatt
cagggcggaattcaaattgagcctgatgaaacccccaaactacttgatcgtgcttcagtt
ctggcttctttaagtttaaaagagcatgtaatgcgatttacttcgacgcatgtattttct
tcctcttcgaatctcgccacgattttagataaatttgtgaaactatgttcaaaattaccc
atcgatccaccaaaaatagtacgtaaccaaattctattcaacgattcagtggttgtgtca
gtttgtgatcctatgttagatgaattcgatgatgaaactcgtgaaagatcaacagctcta
cgtcgtacagctaacctacaatcaaaagaattcgtatgtcatgtaacctataatttacag
aatgaagctttaggagagcaacttatcaaaatgtttaaagaacaaatcgttagtgtttaa
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