Schistosoma mansoni: Smp_076030.1
Help
Entry
Smp_076030.1 CDS
T01095
Name
(RefSeq) putative transducer of erbb2 (tob)
KO
K14443
protein Tob/BTG
Organism
smm
Schistosoma mansoni
Pathway
smm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Smp_076030.1
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_076030.1
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Smp_076030.1
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
Smp_076030.1
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
Motif
Other DBs
NCBI-GeneID:
8353857
NCBI-ProteinID:
XP_018655520
UniProt:
G4VSU0
LinkDB
All DBs
Position
W:complement(53350665..53360250)
Genome browser
AA seq
818 aa
AA seq
DB search
MFMEITVAVNYILSHLYTKLPRRRVDSFGEELEKYLLAKFQHHWYPSDPFRDSAYRCINS
VGPQVDLLLLEAAAVSGLEWGEIEACLPEGLIISVDPGHVVCQYNQSNCTGHDRFLSNHW
PSSSISLSSSGCSSASSISSSNLTNSSQITHQVLYSLQDGWITNNTNMLDVGKRGQFLTK
LRRFENDHGDLLSTAAALSVLVEPDEGIDTKFEPNTTYGVSSLALNRANWNNESSVISTS
IINQEEPSRTESNEVDLKSINPLQAVTYHEKEMLKTMNTFPWGFSENAKESFLSITGNDS
TGGTLSTTQSVIFNAKAHTFHSFHRSSSNPPQSGQLTTTHGKEFIALSANFENSNVLCSK
SDQPFNQMFTNPLPKSYPTYIQPLNSSHPFVQKSTSTPSFTAATFAQTKFGSTKLKSHPK
RTPTRILSPTTVQQTITANENFLLNDRVLTNLLTNNQGFDASNSSNMSAFRRFLPMNTDI
NTTKQTGYIPMNESNIPNHNDYLNINLHENGNSVSEMKFLPISFHQRDTYNHSNNNHNNN
NDTFLISNLENYLLNSSEDTSPNSILERIHLNEVHNDGHTASSYWQSSFEKHLQSTNMTM
ATTDEIDLKSDNTDFTNLADCTNWNNDYHSSANRTTFNHVSNNLLLDNNFKSNLTRLSST
CVSSPAEQHQIQQQQVNMKTNENLTGSIEAPTSNNISNINNDCLLDDVLLSTRMVNLLLE
EDNLTDSINRENMFNYLHSDDDEIEGFKNIKSHFTLTNKESDQNDKDIHTDNSISCNNGH
LAFKEVEPITKYNESNLIHTGTSIAGSVTDNMPSMVAT
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgtttatggaaataaccgtcgcagtaaattatatattatcacatttatacacaaagctt
ccgagacgtcgagttgatagtttcggtgaagaacttgaaaagtatcttctagccaaattc
cagcaccactggtaccctagtgacccgtttagagattctgcttatcgatgcattaattct
gtcggtcctcaggtagatctcctacttcttgaagcagcagctgtgagtgggttagaatgg
ggtgaaatagaagcatgtcttccagaaggtctcattataagtgtagatccaggacatgtg
gtgtgccaatacaaccagtctaactgtacaggtcatgacagattcctttcgaaccactgg
ccatcatcatcaatttccttatcatcatctggatgttcttctgcatcttctatctcatca
tccaacttaacgaattcatctcagattactcaccaagttctttacagtttacaagatgga
tggattacaaacaatacaaatatgttagatgtaggtaaacgaggtcagtttctaacgaaa
cttagacgtttcgaaaatgatcatggtgacttattgtctacagctgctgctttgagtgtg
ttagttgaacctgatgaagggatcgacaccaaatttgagcctaatacaacgtatggagta
agctccttagctttgaaccgtgcaaactggaataatgaatcttctgtaatcagtacatcc
ataataaatcaagaagaaccctctagaactgagtcaaatgaagttgatttaaaatctata
aatcctctacaagctgtaacgtatcatgagaaagaaatgttgaaaacaatgaatactttt
ccatggggtttctctgaaaatgcgaaagaatcttttttatctataacaggtaatgattcg
actggaggaacactatcaacaacgcagtctgttattttcaatgccaaagcacacacattc
cattcatttcatcgttcctcctccaatcctcctcagtcaggtcagttaacaacaacccat
ggtaaagaatttattgcactatctgcgaattttgagaattcaaatgttctatgctcaaaa
tctgatcaaccattcaatcaaatgtttacaaatccattaccgaaatcgtatccaacatac
atacaacctcttaattcatcacatccattcgttcaaaaatcgacatctactccaagtttt
acagcggccacttttgctcaaactaaatttggctcaaccaagttaaaaagtcatccaaaa
cgtacacctactcgtattctttccccaacaacagtacaacaaacaattactgctaatgag
aatttcttattaaacgatcgtgttctgaccaaccttttaacaaataaccagggtttcgat
gcatcgaactcatcaaacatgagtgcatttagaaggtttttaccaatgaatactgacata
aatacaactaaacaaaccggttatataccaatgaatgaatcgaatattcccaatcataat
gattatcttaacataaatttacatgaaaatgggaattcagtatctgaaatgaaatttcta
cctatttcatttcatcaaagagatacatataatcatagtaataataatcacaataataat
aatgatacttttttaatatcgaatttagaaaattacctcttaaattcatcggaagatact
agtccaaatagtattttggagaggattcatttgaatgaggttcataatgatggtcatact
gcatcgagttattggcagtcatcatttgaaaagcacttacaatctaccaatatgacaatg
gcaacaacagatgaaatagacctgaaatcagacaacacagattttactaatttagctgac
tgcacaaattggaataatgattaccattcatcagctaatagaaccacatttaatcatgta
tcgaacaatctacttttggacaataatttcaaaagtaatttaacaagattatcatcaacc
tgtgtttccagtcctgctgaacagcatcagatccagcaacaacaagtaaacatgaaaaca
aacgaaaatttaaccggtagcattgaagcaccgacatctaataacatttctaacattaat
aatgattgtctgctagatgatgttctactttctacacggatggtaaatttgctcttggaa
gaagacaatctaactgattcaattaatcgtgaaaacatgttcaattatttacattcagat
gatgatgaaatagaagggtttaaaaatattaaaagtcattttaccttaacaaacaaagaa
agtgatcagaatgataaagatattcataccgataatagtattagttgtaataatggtcat
ttagcatttaaagaggtagaaccaattacaaaatacaatgaatctaatttaattcataca
ggaacatcgatagctggttcagtcacagataatatgcctagtatggttgcaacataa
DBGET
integrated database retrieval system
