Schistosoma mansoni: Smp_078240
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Entry
Smp_078240 CDS
T01095
Name
(RefSeq) hypothetical protein
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smm03041
]
Smp_078240
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_078240
Spliceosome [BR:
smm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
Smp_078240
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
Smp_078240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
RRM_occluded
HAT_PRP39_C
RRM_7
RRM_PARP14_3
RRM_5
LSM_int_assoc
DUF1360
Motif
Other DBs
NCBI-GeneID:
8353665
NCBI-ProteinID:
XP_018653093
UniProt:
G4VLY9
LinkDB
All DBs
Position
6:complement(7013645..7049646)
Genome browser
AA seq
949 aa
AA seq
DB search
MNNQTEPCESVEINDTTALKNTVKDLCHRLEKNPFDYNAHVQLIECLRKIGDFKTLKIAR
ERMHETYPLTPTLWLQWIEDELKNASTLEEKRQVEVLFKRAIDDYEDINVWLEYCHFAIS
TSDFSSADSIQQAEVIFESALSHQGLNVVGGSMLWEIYREYLTVVWSQLPQDHKEMKLEQ
LNKMDRLFQRQLSIPHLNMEQTLTEYKTFLSDIGIELYQPRKHSDSFIPEEVKTEYEKAL
ERLAVILPFEESIEESTDKSEAETVSSWNIYIDWAVHCAKRKKPKTSKTTDNKNNENIST
NFVISPNELCCLFERAITAHCLDTSLWIRYADYVESQLETDVLRLQKLLSRSVRNCPWCV
ELWQRYALVTETVILENISFKSNTNGAQQESVSNESDLFKEVDGIYETALAAGFTNPNDV
LKIWRSYCDHHFRRLCLLDKASLSWEYRLSLLRATFGRAIEYCFESLHSQSNVDWSLLNY
YAFVEAKYVEDKERARSLWTSLIKLPGHGSRAEYWIPYIQFEQNWGDMKNLLRICAMAIN
SINFDQSELLFQVVLRAVGETGVPVKQYRDIITKIHARRASLMESVKDVQSVKSDAEVPV
KSIESKVPGSRKRKLPDHQNDSATVKSAKVSKPNPTSHGTFVPHDPSKNEFTVFVSNLDY
SVSEEQIQHTFEKCGNVTSVRLVRDYAGRSKGFAYVEFENKESVKTALTLDRQGITRPTS
ESVSCDADTQKQKEEDNSATPKPPNCYDRPMFVSICDPSRLKSCGFKYTVGKKEPEKLFV
RNLDKTVKNEDLEMLFKQYGNIVSVRLATYRNGVPKGHAYIEFTNADDASKALVATNGLE
FRNKILSVSISEPPVRGESGPQGSKSITSTEDKKVFKTPQNIGLSSSHSVGTSVRKSRTQ
LEFLPRAVHRTREIQDPVSEIPMDTENTDSESSTVTGSKDNEYFRRLLK
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatcaaaccgaaccgtgcgaatccgttgaaattaatgacacaacagccttgaaa
aatactgtcaaggatttatgtcacaggctagagaaaaaccccttcgattataatgcacat
gtacaactcatcgagtgtctacggaaaataggcgattttaagacactcaaaattgctcgc
gagcgtatgcacgagacctacccactcactccaacactatggcttcaatggatcgaggat
gagctcaagaatgcttctacacttgaagaaaagcgacaagtagaagttctttttaaacgt
gcgattgatgattatgaagatatcaacgtatggttagaatactgtcacttcgcaatctct
acttcggatttcagttctgcggatagtatacagcaagcggaagtcattttcgaatctgct
ttgtcacatcaaggacttaatgttgttgggggttcgatgctatgggaaatctatcgtgaa
tatctcactgtagtttggtctcagttaccacaggatcataaggaaatgaaactagaacaa
ctgaataaaatggaccgcttatttcagcgtcaactcagcattccacatttgaatatggag
cagacattaactgaatacaaaactttcctgtctgatatcggtatagaactatatcaaccg
aggaaacattcagattcctttataccagaagaagtcaaaacggaatatgagaaagcttta
gagcgtttagctgttattttaccatttgaagaatccatagaagaatccactgacaagtca
gaagcagaaactgtttccagttggaatatttatattgattgggcagttcattgtgcaaaa
cggaaaaagcctaaaacatctaaaactactgataataagaataatgagaacatatctacc
aattttgttatatcacctaatgagttatgctgcctttttgagcgtgctattaccgcacat
tgtttagatacatctttatggatacgttacgcagattatgtagagtctcaactagaaacg
gatgttctgcgtttgcaaaagttattgtctcgatcggttcgtaattgtccatggtgtgtc
gagttatggcagcgttatgcattagtcaccgaaactgtgattcttgaaaatatctcattc
aaatcaaataccaatggagcacaacaggaatctgtttccaatgagtctgatctatttaaa
gaggttgatggtatatatgaaacagctctagcagctggtttcactaatccaaatgatgta
ttgaaaatttggcgtagttattgcgatcatcattttcgtagactttgtttattagataag
gcttctttatcgtgggaatatcgtctgtcattacttcgggcaacatttggtcgagctata
gaatattgttttgaatcactacactctcaatcaaatgttgattggtcacttttaaattat
tatgcatttgttgaagcaaagtatgttgaagataaagaacgcgctcgttctctgtggaca
agtttaataaagttacctggacatgggagtcgagctgaatactggataccttatattcaa
tttgaacagaattggggtgatatgaaaaatttacttcgaatatgtgctatggctattaat
tcaattaattttgaccaatcagaattattatttcaagttgttttacgcgcagttggtgaa
actggggtacctgttaaacaatatagagatattattacaaaaatacacgcacgtcgagct
tctttaatggagtctgttaaagatgttcagtcggtaaagtcagacgctgaggtaccagtt
aaatcaatcgaaagcaaagtacctggttcaagaaaacgaaaactacctgatcatcaaaat
gattctgccacggtaaaatcagccaaagtatcaaaacctaatcctacatcccatgggaca
tttgttccacacgatccatcgaaaaatgagtttacagtatttgtaagtaatcttgattat
tcagtcagtgaggaacaaattcagcatacttttgaaaagtgtggaaatgtgacatctgtt
cgtcttgtacgtgattacgctggtcggtcgaaaggattcgcctatgttgaattcgaaaac
aaagagtctgtaaagactgcacttacactggatagacaaggaattacacgtccgacctca
gaaagtgtgtcatgtgacgctgatacacaaaagcaaaaagaagaggataattcagcaact
ccaaaaccacctaattgttatgatcgtccaatgtttgtatcgatatgtgatccaagcaga
cttaaatcatgtggatttaaatatacggttggcaaaaaagaaccggaaaagttgtttgtg
cggaatttagataaaactgtaaaaaacgaagatttggaaatgttgttcaaacagtatgga
aatattgtgagtgttcgtctggcaacatatcgtaatggtgtcccaaaaggtcatgcctac
attgaattcacaaatgcagatgatgccagtaaagcattggttgccacaaatggcttagaa
ttcagaaataaaatattgtcagtatctattagtgaaccacctgtacgtggtgaaagtggt
ccgcagggctccaaatcaattacatcaacagaagacaaaaaagtgttcaaaaccccccaa
aatattggtttaagtagctctcattccgtcggaactagtgtacggaaatcacgaacacag
ttagaatttttgccgcgtgcagttcatcgaacacgtgaaattcaagatccagtgtcagaa
attccgatggatactgaaaataccgactctgaatcatccactgttactggtagtaaggat
aatgagtattttcgaagactattgaagtga
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