KEGG   Schistosoma mansoni: Smp_080320
Entry
Smp_080320        CDS       T01095                                 
Name
(RefSeq) putative wd-repeat protein
  KO
K19760  dynein assembly factor with WDR repeat domains 1
Organism
smm  Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:smm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:smm03037]
    Smp_080320
   04812 Cytoskeleton proteins [BR:smm04812]
    Smp_080320
Cilium and associated proteins [BR:smm03037]
 Motile cilia and associated proteins
  Dynein assembly factors
   Smp_080320
Cytoskeleton proteins [BR:smm04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dyneins
     Dynein-related proteins
      Smp_080320
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st EIF3I Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_EIPR1 NBCH_WD40 ANAPC4_WD40 WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_IFT140_1st WD40_like Beta-prop_WDR19_1st WD_LRWD1 Beta-prop_DCAF4 Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_WDR75_2nd CEP19 Beta-prop_IFT80_2nd Nucleoporin_N KNTC1_N
Other DBs
NCBI-GeneID: 8347258
NCBI-ProteinID: XP_018647816
LinkDB
Position
1:12152920..12164170
AA seq 422 aa
MKLKRFLLRYYPPGIILDYEQGGATKTKSIDLLELTPDSDTEEILKELCMKEPLITEKRK
IQVQELIERLKSKLCSSSKTKFGQYKILRAHILPLTNVAFNKSGSHFITGSYDRTCKVWQ
TETGFEVYTLEGHRNVVYAIAFNLPFSDKIATGSFDKTARLWSAETGECHYILQGHTAEV
VCIQFNPTSNLIATGSMDTLAKLWDVETGSELASLNGHTAEVIALQFSQCNGRLMLTGSF
DHTVCLWDVRTGERTHHLIGHAAEVSAASFTYDTCLVATASMDKTVRVWDTRTGRQLHLL
TGHQDEVLDVTFDPSGRRLASASADGTARVWNVGISGETKGAKFLSTLIGHEGEVSKVCF
NSPGNLVLTASSDKTARLWDVETGELKDILSGHTDEVFSCAFNYESDTIITGSKDNTCRI
WK
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaaattgaagcggttccttttgcgctactaccctccagggatcatactggattatgaa
caaggtggagctaccaaaacaaaatctatagaccttttggaattaacacctgatagtgat
accgaggaaatcctaaaagaattatgcatgaaggaacctttaattactgagaaacggaag
attcaagttcaggagctaatcgaacgtttgaaatcaaaactttgttccagtagcaaaact
aaatttggtcaatacaaaatattacgtgcacatattttacctctcactaatgtggccttc
aacaaaagtggaagccactttatcaccggatcttatgatcgcacatgtaaagtttggcaa
actgagaccggatttgaagtatacacactggagggacacagaaacgtggtttatgcaatt
gcatttaatttgcctttctcagataaaattgcaactggttcattcgataaaactgctaga
ttatggagtgctgaaactggtgaatgtcattatattctacaaggtcatacagcagaagta
gtttgtatacaatttaatccaactagtaatcttattgctacaggtagcatggatactctc
gcaaaattatgggatgtagaaacaggaagtgaattagccagtttaaatggtcacacagct
gaagttattgcgttgcaattttctcagtgtaatggacgcctgatgttaacaggaagcttt
gatcatactgtttgtttatgggatgtaagaactggtgaacgcacacatcatctgattggt
catgctgcagaagtctcagctgcctcattcacttatgatacttgtttagttgcaacagct
tcaatggacaagactgttagagtgtgggatactagaactggtcgtcaattacacttactt
accggtcatcaggatgaagtattagatgtgacatttgatcccagtggtcgacgtctggct
agtgctagtgctgacggtactgcaagagtatggaatgttggtataagtggagagaccaaa
ggtgcaaaattcctgtctacacttataggacatgaaggtgaagttagcaaagtatgtttt
aattcacctggtaatctagtattaacagctagttcagataaaacagcacgtttatgggat
gtagaaactggtgaattaaaagatattttatctggacatacagatgaagtatttagttgt
gctttcaattatgaaagtgatacaattataactggatctaaagacaatacatgtcgtata
tggaaataa

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