Schistosoma mansoni: Smp_082660
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Entry
Smp_082660 CDS
T01095
Name
(RefSeq) transcription intermediary factor 1-related
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
smm01001
]
Smp_082660
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smm04121
]
Smp_082660
Enzymes [BR:
smm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
Smp_082660
Protein kinases [BR:
smm01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
Smp_082660
Ubiquitin system [BR:
smm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
Smp_082660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
PHDvar_NSD
MEF2_binding
Motif
Other DBs
NCBI-GeneID:
8343400
NCBI-ProteinID:
XP_018650140
UniProt:
G4VC92
LinkDB
All DBs
Position
2:16520854..16531584
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AA seq
705 aa
AA seq
DB search
MDCGNGFKLNLEHSPENPLVCSVCSGREVFGILPACLHVACVTCAEYMRKDDVYCCVLCN
ELSQKIISNPNICNSENTNKSPTCNWCHDNGEQTKSTGHCEDCDIWLCGECLKGHNRMPP
LRNHNITLLSKSEHLGSLRCEAHPNEALECFCEACGVLTCRDCQLSVHRDHGSHRWVGEK
AIQLKAPLEEGIRNLKESGQKLSSALLCATSARTCIEDSFIFSVEKARQDIKLRTSSLID
CIQNRSECLLNELDKKADAYIGRLQETENLIRKLQEQINFASAFSNHLIHNVDNDPASLV
QLYETVKLRLDLLQVLSEQILSDSPSAIDSLDQKLKDRIKESSLWSENVVGWHTMVNTRA
LFLGTWDAEELCRYSGTIAWLPKQAKNTFSLKDNNQTFGSQVAVKTENGLLKNNDFASNQ
FSADTNDFLDSLAELDGDRWTCGEANGESNSSTVGCAICFGVGLLAHCGRCSRAYHLDCH
LPRINSISLTPSWVCGLCADDEVESAVHVEESVNGRFSRSDYLAGCRILMGLLVHEEAVH
FTASVCPACSVPLLSTSQSMPHCPAGHLYHRLAELRLYLEEAASTPNGRSDTYSNPYFDS
NQCRFTCLSDWLIEVDKFWSDAAKETNICGSTKGCLQAAQRLRSHLNSLVREHRPDCENI
LSGKTIANDLINEPLSNNPSVVDNCIPEPYVLNTSPVPLKNEVGE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggactgtggtaacggcttcaagctaaatttggagcattctccggaaaatcctcttgtt
tgttcagtgtgctcaggtcgtgaagtgtttggtatattacctgcttgtctgcatgtagca
tgtgtaacgtgtgccgaatatatgcgtaaggatgatgtatactgttgcgttttatgcaat
gaattaagccagaaaattatcagtaatcctaacatctgtaattcagaaaacaccaataag
tcacccacatgcaattggtgccatgacaatggcgaacagacaaaatcaaccggacattgc
gaagattgcgacatatggttgtgcggtgaatgcctaaagggtcataatagaatgcctcca
ttacgtaaccataacatcacattgctttcgaaaagcgaacatctaggctcactccgatgt
gaagcacatccgaacgaagcactagaatgcttctgtgaggcttgtggagtattaacttgt
cgtgactgtcagctatcagttcatagagatcatggaagccatagatgggttggagaaaaa
gccattcaactaaaggcccctttagaagagggcattcgaaacctcaaggaatcaggacaa
aaactatcttctgccttactttgtgctaccagcgctcgtacttgcatagaggacagcttt
atattcagtgtggaaaaagcccgtcaagatatcaagttacggacgtcttccctcattgat
tgcattcaaaatcgttctgaatgcctcttgaatgaacttgacaaaaaggccgatgcatat
attggccggctacaggagacggagaatttgatacgtaagctccaggaacaaataaatttt
gcgtcggcattttcaaatcatctcattcataatgtagacaatgatcctgctagcttagtg
caattgtatgaaactgtcaaacttcgacttgatttgcttcaagtactatctgaacaaatt
ttgagtgattcaccgtccgcgatcgattcattagatcaaaaactaaaagatcgaattaag
gagtccagtttatggtctgaaaatgttgttggctggcataccatggtcaatacacgagca
ttgtttcttggcacctgggatgctgaggaactatgtcgatattctggaacaatagcgtgg
ttacccaaacaagctaaaaatacattttctcttaaggacaataatcaaacatttggcagt
caggtagctgtaaagacagaaaatggattactgaaaaataatgacttcgcaagtaatcaa
ttttctgctgatacaaatgattttctggattccctagcagagttggatggtgatagatgg
acatgtggagaggctaatggtgaatctaattcttctacagtaggatgtgctatctgtttt
ggagttggactactcgcacactgtgggcgttgtagtcgggcatatcacttggattgtcat
ttacctcggataaatagtatatcattaacacctagttgggtttgtggtctatgtgccgac
gatgaggttgaatctgctgttcatgttgaggagtcagtaaatggaaggttttctcgcagt
gattacctagcagggtgtcgaattttaatgggtttgctagttcacgaagaagctgttcat
tttactgcatcggtttgtccagcatgttcggttccccttctatctaccagtcaatctatg
ccccattgtcctgcaggtcatctttatcatcgtcttgcagaacttcggttatacttagaa
gaagcagcttccactccaaatggccgttcagacacatattccaatccttattttgacagt
aatcaatgtcgtttcacttgcctcagtgattggctcatagaggtagataagttttggtca
gatgctgctaaagaaactaatatttgtggctccactaagggatgtctacaagcagcacaa
cggcttcgatctcatctaaactcacttgttcgtgaacatcgaccagactgtgaaaatatt
ttatcgggcaaaacaatagctaatgacttgatcaatgaaccacttagtaataatccatct
gtcgtagataattgtataccagagccgtatgtattgaatacatctcccgttcctttgaaa
aacgaagttggtgaataa
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