Schistosoma mansoni: Smp_087340
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Entry
Smp_087340 CDS
T01095
Name
(RefSeq) hypothetical protein
KO
K18723
nucleoporin GLE1
Organism
smm
Schistosoma mansoni
Pathway
smm03013
Nucleocytoplasmic transport
smm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Smp_087340
03015 mRNA surveillance pathway
Smp_087340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_087340
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Smp_087340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
8355373
NCBI-ProteinID:
XP_018652161
UniProt:
G4VJF6
LinkDB
All DBs
Position
4:complement(19099392..19114137)
Genome browser
AA seq
519 aa
AA seq
DB search
MSADFETGYLCGVRDAWVSAVVKHNNAVRVYEQKFVRSQRSIARVTDLLEESFNSLSLNV
NSEENEEASINTCQTETTYAPAEIYPSTACMGYYGFSRRQTNQDLLNDIINNIINVRVEV
MNMRRQNLGSSLYPSDSLINEIEEIETRALTLMTSPSPIFDDCDGAMDYQMELIMKKLEL
QAKECLLACKTVTSTGLPKTKQLQSTISVTSDASLSENDSVFPTFGKARALLENYTNILY
PSLWDSKFKMDALKIKQDITCACSQISSHDPPHCIGRLECLLNIFRRTTITDCSEQTKLG
KSRNTNQLVDSFAWQCLYSSSISQAEKQFAYNIDITLVYASLLSGIFALFPDKLFEFFGR
IFLACPALGLFSDPSGLNLIEEMFSTTDILSNWRGVARLFTALLLAHPPPHLGVSRHKLL
NPSLLWRVIAGIVNQEFIPCATAEVLHGILEIGGSVFANLYGKQAKRLLNTISMIVNKSP
VLRQSLPEMQLISLLEKYGSIDTIPDRIGFIDKSFWDSV
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagatttcgagacgggctatctgtgtggtgttagggatgcgtgggtctctgca
gtcgtgaagcataataatgcagttagagtttatgaacaaaagttcgttagatctcaacgt
tcgattgcaagagttacagatctgttggaggagagttttaattcgctttcccttaatgta
aattctgaagaaaatgaagaagcctctataaatacgtgtcaaaccgagacgacttatgct
ccagcagaaatatatccttcgacagcatgtatgggttactatgggttttctcggagacaa
actaatcaggatttactcaatgatatcatcaataacatcatcaatgttcgagttgaagta
atgaacatgcggcgtcaaaatttaggatcctccttatatccatcggatagcttgataaat
gaaattgaagaaatcgagactcgcgctttgactttgatgacttcaccatctcctattttc
gatgattgtgatggagcaatggattatcaaatggaattaatcatgaaaaaattagaactt
caagctaaagaatgtcttctagcttgcaaaactgttacttccacaggtcttccaaaaaca
aagcaacttcagtcgacaataagtgttacgtcagatgcgtcattgtctgagaatgattct
gtgtttccaacgtttggaaaggcccgtgcactacttgaaaattacacaaatatactttat
ccgtcattatgggattcaaaattcaaaatggatgccttaaaaataaaacaggatattact
tgtgcatgcagtcaaatcagttcacatgacccacctcattgtattggtagattagaatgt
ctattaaatatttttagacgtaccactatcactgattgttcagagcaaacaaaacttggc
aaatcacgaaataccaaccagttagtcgacagttttgcatggcaatgtctctattcttcc
tccatttctcaagcagaaaagcaattcgcgtataacattgacataacgttagtctatgct
tctctgctttctgggattttcgcactgtttcccgacaagctgtttgaattcttcggtcga
atattccttgcttgtccggcattgggattattttctgatccaagtggacttaacttaatc
gaagagatgttttcaaccactgatattctctctaattggcgtggggtagctcgattgttt
actgcacttttattggcacacccacctccacatcttggggtttctcgacacaaacttctt
aatccttcactcctttggcgagtaatagcagggatagtaaatcaagaatttattccttgt
gcaactgctgaagttttgcacggtatactggaaattggaggctcagtatttgcaaatctt
tatggtaaacaagcaaaacgtcttttaaataccatcagtatgattgtcaataaatcacct
gtactacgccaatcactaccagaaatgcaattaatatcgttgcttgaaaagtatggaagt
atcgatacaattccagatcgaattggttttattgataagagtttttgggattctgtatga
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