KEGG   Schistosoma mansoni: Smp_087340
Entry
Smp_087340        CDS       T01095                                 
Name
(RefSeq) hypothetical protein
  KO
K18723  nucleoporin GLE1
Organism
smm  Schistosoma mansoni
Pathway
smm03013  Nucleocytoplasmic transport
smm03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:smm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    Smp_087340
   03015 mRNA surveillance pathway
    Smp_087340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smm03019]
    Smp_087340
Messenger RNA biogenesis [BR:smm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     Smp_087340
SSDB
Motif
Pfam: GLE1
Other DBs
NCBI-GeneID: 8355373
NCBI-ProteinID: XP_018652161
UniProt: G4VJF6
LinkDB
Position
4:complement(19099392..19114137)
AA seq 519 aa
MSADFETGYLCGVRDAWVSAVVKHNNAVRVYEQKFVRSQRSIARVTDLLEESFNSLSLNV
NSEENEEASINTCQTETTYAPAEIYPSTACMGYYGFSRRQTNQDLLNDIINNIINVRVEV
MNMRRQNLGSSLYPSDSLINEIEEIETRALTLMTSPSPIFDDCDGAMDYQMELIMKKLEL
QAKECLLACKTVTSTGLPKTKQLQSTISVTSDASLSENDSVFPTFGKARALLENYTNILY
PSLWDSKFKMDALKIKQDITCACSQISSHDPPHCIGRLECLLNIFRRTTITDCSEQTKLG
KSRNTNQLVDSFAWQCLYSSSISQAEKQFAYNIDITLVYASLLSGIFALFPDKLFEFFGR
IFLACPALGLFSDPSGLNLIEEMFSTTDILSNWRGVARLFTALLLAHPPPHLGVSRHKLL
NPSLLWRVIAGIVNQEFIPCATAEVLHGILEIGGSVFANLYGKQAKRLLNTISMIVNKSP
VLRQSLPEMQLISLLEKYGSIDTIPDRIGFIDKSFWDSV
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgagtgcagatttcgagacgggctatctgtgtggtgttagggatgcgtgggtctctgca
gtcgtgaagcataataatgcagttagagtttatgaacaaaagttcgttagatctcaacgt
tcgattgcaagagttacagatctgttggaggagagttttaattcgctttcccttaatgta
aattctgaagaaaatgaagaagcctctataaatacgtgtcaaaccgagacgacttatgct
ccagcagaaatatatccttcgacagcatgtatgggttactatgggttttctcggagacaa
actaatcaggatttactcaatgatatcatcaataacatcatcaatgttcgagttgaagta
atgaacatgcggcgtcaaaatttaggatcctccttatatccatcggatagcttgataaat
gaaattgaagaaatcgagactcgcgctttgactttgatgacttcaccatctcctattttc
gatgattgtgatggagcaatggattatcaaatggaattaatcatgaaaaaattagaactt
caagctaaagaatgtcttctagcttgcaaaactgttacttccacaggtcttccaaaaaca
aagcaacttcagtcgacaataagtgttacgtcagatgcgtcattgtctgagaatgattct
gtgtttccaacgtttggaaaggcccgtgcactacttgaaaattacacaaatatactttat
ccgtcattatgggattcaaaattcaaaatggatgccttaaaaataaaacaggatattact
tgtgcatgcagtcaaatcagttcacatgacccacctcattgtattggtagattagaatgt
ctattaaatatttttagacgtaccactatcactgattgttcagagcaaacaaaacttggc
aaatcacgaaataccaaccagttagtcgacagttttgcatggcaatgtctctattcttcc
tccatttctcaagcagaaaagcaattcgcgtataacattgacataacgttagtctatgct
tctctgctttctgggattttcgcactgtttcccgacaagctgtttgaattcttcggtcga
atattccttgcttgtccggcattgggattattttctgatccaagtggacttaacttaatc
gaagagatgttttcaaccactgatattctctctaattggcgtggggtagctcgattgttt
actgcacttttattggcacacccacctccacatcttggggtttctcgacacaaacttctt
aatccttcactcctttggcgagtaatagcagggatagtaaatcaagaatttattccttgt
gcaactgctgaagttttgcacggtatactggaaattggaggctcagtatttgcaaatctt
tatggtaaacaagcaaaacgtcttttaaataccatcagtatgattgtcaataaatcacct
gtactacgccaatcactaccagaaatgcaattaatatcgttgcttgaaaagtatggaagt
atcgatacaattccagatcgaattggttttattgataagagtttttgggattctgtatga

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