Schistosoma mansoni: Smp_087520
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Entry
Smp_087520 CDS
T01095
Name
(RefSeq) TATA-binding protein-related
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
smm
Schistosoma mansoni
Pathway
smm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Smp_087520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smm03000
]
Smp_087520
03021 Transcription machinery [BR:
smm03021
]
Smp_087520
Transcription factors [BR:
smm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
Smp_087520
Transcription machinery [BR:
smm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
Smp_087520
RNA polymerase III system
TFIIIB
Smp_087520
RNA polymerase I system
SL1/TIF-1B
Smp_087520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
8355394
NCBI-ProteinID:
XP_018644376
UniProt:
A0A3Q0KIU1
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MQTNEHINGTTETEDISFMESGTDILDFLNTSDTENEDVKDIIGNEPDKSTEEDPCNEEA
SSLTLSITNVVVMASLQCHLRLKEIARTSVNVEYKALQNHVIMRLRSPYTVATIWSSGKI
WCTGANSLAKAKIGARRIARRIAKCGFPCHFSKYRVVNIMATCKLPFGVRLEELVKERPM
QMSYEPELAPGLTFKTDINSSTSLKLFSTGRIVIMGSSLDSIGSLVEELVPIAALHQTDE
PVPDVNDIQERDEAHVVLKAARYMNMLPNNGGFNGLVYDIDDEYQNSDESDFYEDVGGVG
GARHSFSTDDSTDSGASIDSGGVSTKVKRRIKKKSHLSTVMGNTFSSASQLRNYDSSRSG
GPLHLLTPREAASLAFSKRAAGNIEDAKDLVATAGELRRQREMLLQGTTQNSVRTEARSN
FSQGDPTWSRKAVASGSTKRACVVTYSGTEDSESQDLYNTVELRSQGYTQSNVPSIEQQQ
QQPHVKIVHAPSLMPLNSTNPPVQVSTVMTPINTAANPLQYVLIKPSTNIGQTVYNNVMP
TVQPTISYTTTPCITPIQTNSIVQLSLPLSSTGVDGQNLITTSVTSPAASVATTNTTVYP
IRLSNNILPNYISSVNDGKMMTFATGTDTYTNHLIGFPNTTQIFPNVYQVDPNSIIPGQT
APLVFGSSLLTSFQPTNNVIHPQIHLPAPSVLSGSPNIFVGNFSSGITLKTEPVQTVGSV
TSIPFTPTFSYQQPGGYN
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaaacgaacatattaatggcaccactgagacagaagacatttcatttatggag
agtggaacggatattttggattttttaaacacatctgatacagagaatgaagatgtaaaa
gatattattggaaatgaaccagataaaagtactgaagaagatccatgcaatgaagaagca
tcttccttaacactttccataacaaatgtagttgttatggctagccttcagtgtcactta
cgattgaaagaaatagccaggactagtgttaatgtggaatataaagctcttcagaatcat
gttataatgcgtttacgatcaccgtatacagtagcaacaatttggtctagcggaaaaatt
tggtgtaccggggctaattcgcttgcaaaagcgaaaattggcgctaggcgtattgctaga
cgaatagcgaaatgtggatttccgtgtcattttagtaaatatcgtgtagttaatattatg
gctacttgtaaattaccattcggtgtcagattagaagaattagtcaaagaacgaccgatg
caaatgagttacgaacctgagctagctcctggtctcacttttaaaactgacattaattca
agtacatctctaaaacttttttcaacaggacgaatagttattatgggttccagtttagat
tcaatcggttcgttagtcgaagaactagttccaatcgctgcattgcatcaaacagatgaa
ccagttccagatgttaatgatatacaagaacgtgacgaagctcatgtagtgttaaaagca
gcacgatacatgaatatgttgccaaataatggtggtttcaatggattagtttatgatatt
gatgatgaatatcaaaatagcgatgaaagtgatttttatgaagatgtaggcggtgttggt
ggtgctcggcatagtttttctacagatgattcaactgacagcggggcttctattgacagt
ggtggtgtaagcactaaagtaaagcgtagaattaaaaagaaaagtcatttatctactgtt
atgggtaataccttttcctctgcatctcagttgcgaaattatgattcatcgcgatctggt
ggtccgcttcatttattaactcctagagaagctgccagtttagccttctctaaacgggca
gctggaaatattgaagatgctaaagatttagtagcaacagctggagaattaagacgtcaa
cgtgaaatgttacttcaagggacaactcaaaatagtgtacgaacagaagctcgttcaaat
ttttctcaaggtgatcctacatggtcccgtaaagctgttgcttcaggatcaacaaaacgt
gcttgtgtggtcacttattccggaacagaggatagtgaatcacaagatttgtataatact
gttgaactacgtagtcaaggttatacacaatctaatgttccttcaattgaacaacaacaa
cagcagccacatgttaaaattgttcatgcaccatctttgatgccattgaattcaacaaat
cctccggtacaagtttctaccgtaatgactccaatcaatactgctgccaatcccttacaa
tatgtattgattaaaccttctacaaatattggtcagacagtttacaacaatgtaatgcct
actgttcaaccaactatcagttatactacaacaccatgtattacacctatacaaacaaac
tctattgtacaattgtccttaccattatcaagtactggtgtggatggtcaaaatttaata
acaacaagtgtcacatcacctgctgcctctgttgctactactaatactactgtttatcct
atccgtctatccaataatattctgcccaattacatatcatcagtaaatgatggcaagatg
atgacctttgctactggtactgatacgtatacaaatcacttaataggctttcctaataca
actcaaatatttccaaatgtttatcaagttgatccaaattcaattatacctggccaaact
gctccacttgtctttggatcttctttactcacttcatttcaacctacaaataatgttatt
catcctcagatacatttacctgccccaagtgttctatctggttcaccaaatatttttgtt
ggaaatttctcttcaggtattactttaaagacagaacctgtacaaacagttgggagtgta
acttcaattcctttcactccaacattttcttaccaacaacctggaggttataattga
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