Schistosoma mansoni: Smp_090070
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Entry
Smp_090070 CDS
T01095
Name
(RefSeq) WD-repeat protein, putative
KO
K11293
protein HIRA/HIR1
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_090070
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
Smp_090070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Hira
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
EIF3I
HIRA_B
Motif
Other DBs
NCBI-GeneID:
8355907
NCBI-ProteinID:
XP_018646424
UniProt:
G4LYU7
LinkDB
All DBs
Position
Unknown
AA seq
1219 aa
AA seq
DB search
MRLLKPTWVSHGFLSKDKAVGRPIYSLDIHPDGSRLATGGVIDTCGVVVLWNMAPIRDPT
LESSDNSCLKLFQMDSHQACVNCVRWSPSGRWLASAGMDKVIMLWSKTAGTSRPVQVFGS
KEPTKFTEHWRCVSTLRGHSGDIIDLSWSHDGSRLASTSVDNSVIVWCRQKLPNGSGYTN
NSFYLQATLTGHKGFVKGVTWDPVGRYLASQGDDLTVKIWRTADWQEEASISKPFTKASG
QSQVMRLSWSLDGSTLASPHAINNGFPTAKLIDRTNWSPSLDLVGHRKHVICARYNPNVL
RKQDGSGIPGAVCLALGSKDRSVSVWSTAGRRARVVVHDLFTNSVCDLSWSSDGRELMAC
SLDGSVCYMGFTHKELGTPWSLKEVIQLHYKIYGQSLLDKFRPITSNGLSMELDPSDENK
DNSSILNQSDILLETPEALALQKTQAELRTKLKHSPTRDKQAKCLPKGPSKQIETVSKDG
RRRITPKFLGHLDSPDEDANSNPQFSSPQSNRCESKLNSENSSDLISDINKINPIVAVST
TGTNVTTTTTHSINSVMPNTVATDDAIPTVTLVQVDNTVSMSVDKTCTSNVVVPTPISTV
NTVDSKGNETALPSTSVTVCSSHSPVESKVNSESQSLATFVQAPSKKLPLDSTTFTTTTT
TAMDQETGVELKRPRLDNNDDDTDHIKPISDETNKQVTSTGNKQRKRRIRLFTEEEKSPK
SGLDVSKSSVSQNKKPCFTPESSPPKPKLTLGSTLESTDNTSSSVQNPPSGATSFAPFLI
TTSDQLGNASKVQFVCSNLIDGPIIVQLINSSNSSTRSEEIPKLSNSVPRIIASRSDRRL
WELICSDRLTSYAYSDEVIAVGDNKGRIQLIYSTGGHICPNLLLDCVHTLALTTETTESS
QSSLTTSNRFFSTCTESTTNNSNLSRLHAVVSGNEQQQQQTTLQNGNNNHFTLPNNSIMN
KFNVNRKYRLAALCRSGRLIIWNFCLNNCGFGSISTVFNNCIFPQVLIETNIKDVLNGGH
NSRFSSLTFGPNGFPVVYLQDNSSYLFHIESRIWIELFDASDIVRCQFAMNSSRGCPPGP
LSACQQLNKMTTNVQRSNHFTSSNSNVISASCRKVSNQNFLESQTQLALSFGSSNEYRYW
LTRWFRQLIEDNEEERVRQIIQDLIGPVQATTKLHSTWQSEVKGISRLVLAKELLSLFAL
NLHLQRLYVELKEMLNESR
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgcttaaaccgacctgggtatcccatggattcctatcaaaggacaaagctgtt
ggtcgacctatatatagtttagatatacatcctgatggctcacgtttagctactggtggg
gtaatcgacacatgtggagttgttgttttgtggaatatggctcctattcgagatccaact
ttagagtcaagtgataactcttgtcttaagcttttccagatggacagtcatcaagcttgt
gtcaactgtgttcgctggtcaccatctggtcgttggttagcgtctgctggaatggacaaa
gttattatgttatggtcgaaaacagccggtacatctcgtccagttcaggtattcggttca
aaagagcctaccaagtttacggaacattggcgttgcgtttcaacacttcgaggtcacagt
ggtgatattattgacttatcttggtctcatgatggaagtcgtttagcttccaccagtgta
gataattctgtcattgtttggtgtcgtcaaaaacttcctaatggttcaggttatacaaac
aattctttctatttgcaagcaactttaactggtcataaaggttttgttaaaggtgttact
tgggatccggttggtcgttatttggctagtcaaggagatgatttaactgtgaaaatatgg
cgtactgcagactggcaggaagaagctagcatcagtaaaccatttacaaaggctagtgga
caaagccaagttatgcgtttatcatggagtttggatggttcaacacttgcttcaccacat
gctataaataatgggtttcctactgccaaacttattgatcgaacgaattggtcaccaagt
ttagatctagttggacatcgtaaacatgtcatttgtgcacgttacaatcctaatgtttta
cgtaaacaagatggatcagggattccgggtgctgtttgtctagctcttggtagtaaagat
cgttctgtttctgtatggtcgacagcgggtcgtcgtgcacgagttgttgttcatgatctg
ttcactaattctgtttgtgatttatcatggagttctgatggtcgtgaattaatggcttgt
tcactggatggatctgtttgttatatgggttttactcacaaagaattaggaactccatgg
tcactgaaagaagttattcaattacattacaaaatttatggacaaagtttattagataaa
tttcgtccaattacatcaaatggtctatctatggaattagatccttctgatgagaataaa
gataattcaagtatactgaatcaaagtgatatcttgctagaaactcctgaagctttggct
ttacaaaaaactcaagctgaattacgtacaaaattaaaacattcaccgacaagagataaa
caagcgaaatgtcttccaaaaggtccatccaaacagattgaaactgtaagtaaagacgga
cgacgaagaataactcctaaatttctaggtcatttggacagtcctgatgaagatgctaat
tccaatccacaattttcatcacctcaatctaacagatgtgaaagtaaattgaactcggag
aatagttcggacttgatttcagatataaataaaataaatcctatagtagcagtatcaaca
actggaacaaatgtaacaacaacaacaactcattctattaattctgttatgcctaatact
gtagccactgatgatgctattccaactgttacacttgtacaagtcgacaatactgtttct
atgagtgttgataaaacatgtacttcgaatgttgttgttcctacacctatatctactgta
aatacagttgattcgaagggaaacgagactgcattaccgtcaactagtgttactgtatgc
tcaagtcattcacctgtagaatcaaaagtcaattctgaatcacaatcattagctacgttt
gttcaagcaccatcaaagaaattaccacttgattccactacgtttactactactaccact
actgctatggaccaggaaactggggtagaactgaaacgaccacgtttagataacaatgac
gatgatacagatcatattaaaccgatcagtgatgaaacgaataaacaagtcacttctact
ggtaacaaacaacgtaaaagacgtattcgattgtttactgaagaagaaaaatctcctaaa
tctggattggatgtttcaaagtcgtctgtgtcacaaaataaaaagccttgttttacaccg
gagtcgtcaccaccgaaacctaagctcaccctcggatctactttggaatctactgataat
acatcatcatctgtacaaaatccaccttcaggtgcgacaagttttgcaccatttctaatc
actacctctgatcaattagggaatgcatcaaaagttcagtttgtatgttctaatctaata
gatggtccaattattgtacaattaatcaactcatcgaattcatctacacgtagtgaagaa
attccaaaattatcgaattcagtccctcgtataattgccagtcgtagtgatcgtcgttta
tgggaattaatatgttcagatcgtttaacttcatatgcatattcagatgaagttattgct
gttggtgataacaaaggtcgtatacaattaatctacagtactggtggtcatatatgtcct
aatctcttattagactgtgtgcatacattggcattgactactgaaaccactgaatcatct
caatcatctttaacgacttctaatcgttttttctcaacatgcacagaatctacaactaat
aatagcaatcttagccgattacatgccgttgtcagtggaaatgaacaacaacaacaacaa
acaacacttcagaatgggaataacaatcatttcacattacctaacaatagtataatgaat
aaattcaatgttaatcgtaaatatcgtttagctgctttatgtcgatctggaagattgatc
atatggaatttctgtttaaataattgtggtttcggttcaatatctactgtattcaataat
tgtatatttcctcaagttttaattgaaaccaatattaaagatgttttaaatggtggtcat
aattctcgatttagttctcttacatttggtccaaatggatttcctgttgtatatttgcaa
gataattcatcttatttatttcatatagaaagtcgtatttggattgaattatttgatgca
tctgatattgtacgttgtcaattcgctatgaattcttctcgtggttgtcctcctggtcca
ttatctgcatgtcaacaacttaataaaatgactactaatgtacaaagatcaaatcatttc
actagttcaaattcaaatgtcatttcggcttcttgtcgaaaagtttcaaatcaaaatttc
cttgaatctcaaactcaattagctctatcatttggatcttctaatgaatatcgctattgg
ctaactcgttggttccgtcaactcattgaagataatgaagaagaacgtgttcgtcaaata
atccaagatctcattggtcctgtacaagcaactactaaactacattctacttggcagtct
gaagtaaagggtatatcaagacttgtattagctaaagaattattaagtttatttgcactg
aatttgcatttacaacgtttatatgttgaattaaaagaaatgctgaatgaatcaagataa
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