Schistosoma mansoni: Smp_090450
Help
Entry
Smp_090450 CDS
T01095
Name
(RefSeq) Host cell factor (dHcf) [Contains: HCF N-terminal chain
KO
K14966
host cell factor 1
Organism
smm
Schistosoma mansoni
Pathway
smm03083
Polycomb repressive complex
smm04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
Smp_090450
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
Smp_090450
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smm01009
]
Smp_090450
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_090450
03029 Mitochondrial biogenesis [BR:
smm03029
]
Smp_090450
Protein phosphatases and associated proteins [BR:
smm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
Smp_090450
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
Smp_090450
HMT complexes
COMPASS/SET1 complex
Smp_090450
MLL-HCF complex
Smp_090450
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
Smp_090450
Mitochondrial biogenesis [BR:
smm03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
Smp_090450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_5
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_4
Kelch_6
Kelch_1
fn3
Pur_ac_phosph_N
NANM
Motif
Other DBs
NCBI-GeneID:
8355970
NCBI-ProteinID:
XP_018645326
LinkDB
All DBs
Position
2
Genome browser
AA seq
1265 aa
AA seq
DB search
MIIGTFSHDPAGGTLSKMAGVGPIVRWRKVSAATGNVPRSRHGHKAVAIKDLIVVFGGGN
EGIVDELHVFNTTTCQWFLPAVHGDIPPGCAAFGMLAENTRVLMFGGMLEYGKYSGDLYE
LQASRWEWKRLKPKPARNGPCPCPRIGHSFTLVGQRAFLFGGITNDSDDPKNNIPRYLND
LYTLELKPNSSTMCWDIPNTYGQPPTPRESHSAVAYQVLDGMVKKWRLLVYGGMSGNRLG
DLWQLEIDTMTWIKPIVSGDLPAPRSLHSATVIGNRMFVFGGWVPLVMEEIKMTAQEKEW
KCTNTLASLNLDTMAWEPLTMEVADECLLPRARAGHCAVAVHSRLYVWSGRDGYRKAWNN
QVCFKDLWFLETDRPAAPTRVQLVRAGTQSLEVTWGSVPTADAYILQIQKYDVSPSTTST
HSLTSSPVDTSGIVKAPLTASAGSLNFSRAGAISQALITTPATANSVPIPTPIRLPTTTA
AVGSMIPNSCVTMAGQRGPTVVTPTGLKITPVPGSAVTGRTATIATVAQHSSGVNPCGPT
IIRSSCPPIAPKQHVSCLSSILCKMHETIQHQVVEFLQHFILGIIINNPRIPLITVGGKQ
VVSAVSVANNSGVVNSNPNQVVHIVNKSTGLIKPIKLVSTTTSSSTASKTITVQQASVGT
GVSVPKVIKAIPATMLQMSASGKPILIAGGGVCRPGQTTVQVSGPVHRPTGQQIVIMSPT
ISSSAAIPASSNLYLSSGGATSQIIRQANQTQVTLVRRDPYDSTHGNANDPSNNTSSILQ
TIPQLDGTIDDDDDDVGEDGGSTKNDASSAIILESNLVKEKLHMKGNVDILQTGSQHSPA
YTTDANSDLHTSLAVEAAAELLADIGEDNTSAYADQNSASVSKETDQAVRSLIDTKPNVL
SENVSSSTENEKSFRGDSGSYEDPVHAKDEKEGNGSSLTDPLETLALVAARRSGSGDDHG
GGQISRSVTGLVANSHSIVTTSTNCSLINSSTTVTPGTLISRGDNSWHDVGVIKSTNYTV
TMYSACTNDAGVHMEAISALQGPNGIGSNGLTTQGPKFQLAPGTAYKFRVAGLNACGRGP
WSEISAFKTCLPGYPGAPSAIKITKSDSGAHLTWEAPQNTAGKITEYSVYLAVKSQTAGQ
DSAESKVGSTPSGMAFVRVYCGQSPSATVTSATLATAHLDLSSKPAVIFRIAARNEKGYG
PATQVRWLQDVSNTPSSVAGINPQSINFQATNASQPITKRTLSLGSSQEGAFTTPVKRLK
SDDQL
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgattattggaacgttttctcatgatcccgcgggtggtacgctttccaagatggctggt
gtaggtcctatcgttaggtggaggaaagtttcagcggccactgggaatgtccctcgatca
agacacggacacaaagctgtggctattaaggacttgatcgtggtttttggtggtgggaat
gagggaatagtagacgaacttcacgtgtttaatacgacaacttgccaatggtttctaccc
gctgtacacggagatattccgccaggatgtgcagccttcgggatgttggcagaaaacact
cgtgttctcatgtttggtggcatgcttgaatacggcaaatattcaggtgacttatacgaa
ctacaagcctctcgttgggagtggaaacgtctaaagcctaagcctgctagaaatggcccc
tgtccatgcccaaggatcgggcatagttttactcttgttggtcaacgagcatttctattt
ggtgggataacaaatgatagtgatgaccctaaaaacaatataccaagatacttaaacgat
ctgtacactctggaattaaaacctaattcaagtactatgtgttgggatatcccaaacaca
tatggtcagccgcctacacctagagaatctcacagtgcagtagcttatcaggtccttgat
ggaatggtaaagaaatggcgtcttttggtatatggtggcatgtccggtaatcgacttggg
gatctttggcaattagaaattgatactatgacatggatcaaacctatcgttagtggagat
ctgccggctccacgcagtcttcatagtgcaactgtaatcggaaaccgaatgtttgtcttc
ggtggatgggttcctttggtcatggaagaaattaaaatgacagctcaagaaaaagaatgg
aagtgtacaaatactttggctagtctcaatcttgacacaatggcttgggaaccattgaca
atggaagtcgctgacgaatgtcttctacctcgagcccgcgctggacattgtgctgtagct
gttcacagtcgtttgtacgtttggtctggtcgtgatggatatagaaaagcatggaataat
caggtttgcttcaaagacttatggtttttggaaactgatcgccctgctgctccgacaaga
gttcaattagttcgtgctggcactcaaagcctcgaagtaacttggggttcggtgcctact
gcagatgcttatattttgcagattcaaaagtatgatgtttctccttccacaacttcaaca
cattccctgacatcttcaccagtagatacaagtggaattgttaaagctccattaactgca
tctgctggttctctgaacttctcaagagctggtgctatttcacaggccctcattaccaca
ccggctactgctaattcggtcccaataccaacccctatcagattgcctactactactgcc
gctgttggttcaatgataccaaactcatgcgtcactatggctgggcagagaggaccgact
gtagttacaccgacaggtttaaagatcacacctgtgccaggcagtgctgttacaggacgg
acggcaactatcgcaactgtagcacaacattctagtggagttaatccatgtggtccgaca
atcatccgaagttcatgtcctccaatcgctccaaagcaacatgtgagttgcctttctagt
attctgtgtaaaatgcatgaaactatacaacaccaagttgttgaatttttgcaacatttt
atcttgggtattattataaataatccgaggattccgcttattactgttggtggcaagcaa
gtggtttccgcagtttctgtcgcaaataactctggtgtagttaattcgaatccaaatcaa
gtagtacacattgtaaacaagtcaaccggtttaattaaacctattaaactagtttcaact
acaacttcatcttcaactgcttctaaaaccatcactgtacaacaagcatcagttggaact
ggcgtttcagttccgaaagtaatcaaagctattccagcaacgatgcttcaaatgtctgca
tctggtaaacctattttaattgctggtggtggtgtatgccgtccgggccagacaaccgtt
caagtttcaggtcctgtacacagaccaactggacagcaaatagttatcatgagtccaaca
atatcctcatcagctgccattcctgcatcatcaaatttgtacttatcttctggaggtgct
actagccaaataatacgacaagcaaatcaaacacaggtaaccttagtccgacgggatcca
tatgattcaactcatggtaatgcaaatgatccaagtaataatacatcgtcgattctccaa
actattccacaattggatggtactattgatgatgacgatgatgatgttggtgaggacggt
ggtagtactaaaaacgatgcttcatcagctatcattttggagtctaatttagtcaaagaa
aagttacatatgaaaggaaatgtggatattctacaaactggaagtcaacattcgccagct
tatacaacagatgcaaattccgatttacatacgtcattagccgttgaagctgctgctgaa
ctgcttgcagacattggtgaagacaatacatcggcttatgcagaccaaaattcagcaagc
gtttcaaaagaaactgatcaggcagtcagaagtttgattgataccaagcctaatgtatta
tccgaaaatgtttcttctagtactgaaaatgaaaaaagtttcagaggagattcagggtct
tatgaagatccagtacatgctaaagatgagaaagaaggaaatggtagttctcttactgat
cctttggaaacattagcgttagttgctgctcgccgaagtggaagtggtgatgatcacgga
gggggacaaatttctcgttctgtgacaggtttggtcgcgaattctcattcaatcgtaaca
acatctaccaattgttctttaataaattcttcgactactgtaacacctggtacattgatt
agtcgaggtgataattcttggcatgacgttggcgttatcaagtcgacgaattatactgta
acaatgtattcagcgtgtacaaatgatgctggtgtacatatggaagctatcagtgcatta
caaggtcccaatgggattggatccaatgggctaactacacagggtcctaaattccaactc
gctcctggaacagcctacaaattccgtgtcgcaggcctcaatgcttgtggtcgaggtccc
tggtcagagataagcgcattcaaaacctgtttaccaggttatccaggggctcccagtgct
ataaaaataactaaatcggacagtggtgcacatttaacttgggaagcgcctcagaataca
gcggggaagatcacagagtattctgtctatttagctgtcaaatctcagactgcaggacaa
gattctgcagagagcaaggtcggttctacaccatctggcatggcatttgttcgtgtatat
tgtggtcaatcaccttcagcaactgttacttctgcaacattggctactgctcatttagat
cttagttcaaaacctgctgtgatctttcggattgctgctcggaatgaaaaaggatatgga
ccggcaacacaagttcgttggcttcaggatgtatctaatacaccttcctctgttgctggg
ataaaccctcaatccatcaatttccaagcaacaaatgcctcacaaccgattactaagcgt
actctaagtttagggtcatcacaagaaggagcttttacaacaccagtcaagcgattaaaa
tcagatgatcaattatag
DBGET
integrated database retrieval system
