Schistosoma mansoni: Smp_093430
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Entry
Smp_093430 CDS
T01095
Name
(RefSeq) putative gyf domain
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_093430
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
Smp_093430
Surveillance factors
Other surveillance factors
Smp_093430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
8349176
NCBI-ProteinID:
XP_018649641
LinkDB
All DBs
Position
2:complement(2470949..2520444)
Genome browser
AA seq
1120 aa
AA seq
DB search
MQSNVERSETGRRLSYSRAEILALYDCGKSIALHNDVVKKSHTGTRAPRPKPQRKKTSYS
QSSDGDAHKTHGSSGEDLTTQEVDPNTHSWHRMNRNAWNAQSGSSSHHPHQRYPSGPTGD
VDPSTLVSQANGPLRPTNETKRGGHGDWSRGCAGWRQRSYSGSEQSDIFYYNHSNHRGRG
NGHPSNEVDGNTGRGRGRGRGSGRQGLTHREPVGGGQSQTSGGNACRPASCLVDTPGGQL
NQQTKNGRIYSKSFCSDPPPGFDLPIHEKPSNESSFDKTCQKEDVFIDNIDSVPIHHCQP
VNDDSSKSSTQINSKQSIIHPCHWYYIDLFTCTQGPFTNQQMSTWLASGYLPLSLKIRRD
CDECFLSLVDHMNLAGRIPFWTGYNQPHITNVNLSTLSGLNYNSNNNNGNQVLIHSTIIN
NQTPSSSTPPGITNRKTDCEISLPQSTLTTFDENTIQLQNKGDVNVSDNDQTQVTINNDS
ITSHISTLSSNTISSSIAEYSESQTLHHSSSFTGIDEKALLDLYNEAKTIALHTSKIEAE
RLALANKLAEINSTTAKLLSNLCPTQLSSTLTESLIRTTNAVQTELARILEPCINNDGDN
NTIPGTTFSNTLDDGSNNNIKTDNDIISPILNDHSNSTTVNSSSKPSTLPSLGIELTKSL
STLTILDNEHPLDSTINNHEPNKHTNNNAHVGNNNVAADDDDNDNDKKHQQFQSIEKSIP
ECDIAVSLTSNNEQETLTTTKKSKRKNKKTNKKLTADEVRQLAWESEFNRRKAASLEQSL
AEEERLKKLAEEEAMAIAAEKALAVQEKNRTLIEQRKREISRLKADSELAQLKLPESARW
AAAATSNINITNKAAPIDLRSIQAAQAAEEAKRKYHDALMSEQVAVLIAAEAAPLSTKTS
LSWSQIAKSDTISLTSINPCISKDDKTTERSKCAVVISSNSNNNGPIQKSTGHSSNSNNT
SSLTQLDYLKITSSSKTSLNNNITSISSSTSISCTPKVNNTIINSVTTTTTNTPSIWDLP
VTNNLDNTNSGTGKKGSSKKKKKNREVSLLPAKEELAHWCESQLSSIPLSGVDLPTLVDL
LCELQATDEILEFIETSLGRSKRITQFSKDFLQKRSLFRQ
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaaacgtcgagcgttctgaaactggaaggcgactgagctattccagagctgaa
attttagctctttacgactgcggaaagtccattgctttacataatgatgtggttaaaaaa
tctcatactgggacccgtgcacctcgacctaaaccccaaagaaaaaagactagttattca
cagtcaagcgatggagacgcccataaaactcatggtagtagtggtgaggatctaactact
caagaagttgatcctaacacccatagctggcatcgtatgaaccgtaacgcctggaatgca
caatcgggtagttcttcacaccaccctcatcaaagatatccaagtggaccaactggggac
gtcgatccttcaactctcgtttcccaagcaaatggtcccttgcgtcccactaatgaaaca
aaaagaggagggcatggtgactggtcccgaggatgtgctggttggcgtcaacgttcttac
agtggcagtgagcaatctgatatcttctattataatcactctaatcaccgaggtcgtggt
aatgggcacccatccaatgaagttgacggaaatacgggacggggacgtggtcgagggcgt
ggttccggacgtcaaggcttaacacatcgagaacctgttggtggtggtcagtcacaaact
tcaggcggtaatgcttgtcgacctgccagttgcttagttgatactcctggagggcaatta
aatcaacaaaccaaaaatgggaggatttactccaaatcattttgtagtgatccaccgcct
ggtttcgatctaccaattcatgagaaaccttctaatgagtcatcatttgacaaaacctgt
caaaaagaagatgttttcatagataatattgattcagtacctattcatcattgccaacct
gtgaatgatgattcttcaaagagttctacacaaataaattctaaacaatctattatacat
ccttgtcattggtattatatcgatttgtttacatgtactcaaggtccatttacaaatcaa
caaatgagtacatggcttgctagtggttatttaccattatcattaaaaatacgtcgtgat
tgtgatgaatgttttcttagtttagttgaccatatgaatttagctggacgcattccattt
tggactggatataatcaaccacatattacaaatgtaaatctatcaacactttctggatta
aactataatagtaataataataatggtaatcaggtattaattcattcaactattatcaac
aaccaaacaccctcctcctcaactccaccaggtattacaaaccgtaaaacagattgtgaa
atttcacttccacaatccacattaacaacatttgatgaaaatacaattcagcttcaaaac
aaaggtgacgttaatgtttctgataatgatcaaactcaggtaacaatcaataatgattca
ataacatcacatatctcaacattatcatcaaatactatctcgtcttccatagctgaatat
tcagaatcccaaactcttcatcattcatcttcatttactggaattgatgaaaaggcattg
ttggatttatataatgaagctaaaactattgcattacatacatctaaaattgaagcagaa
cgtttagcattagcaaataaattagctgaaattaatagtactacagctaaattattatca
aatctatgtccaacacaattaagttctacattgacagaatcattaattcgtacaacaaat
gctgtacaaacagaattagcacgtatattagaaccatgtattaataatgatggtgataat
aatactattcctggaactaccttctccaatactcttgacgacggttcgaataataatatc
aaaactgataatgacatcatttcacctattcttaatgatcatagtaacagtacaactgtt
aattcgtcatcgaaaccctcaacattaccatctttaggaatagaacttacaaaatcatta
tctactctaacaatacttgataatgaacatcccttagattcaacaattaacaatcatgaa
cctaataagcatacaaataataatgcacatgttggtaacaacaatgttgctgctgatgat
gatgataacgataatgataaaaagcatcaacaatttcaatcgatagaaaaatcaattcct
gaatgtgacattgccgtatcattgacttcaaataatgaacaggaaacattaacaactaca
aagaaatctaaacgtaaaaataagaaaacgaataaaaaattaacagcagatgaagtacgt
caattagcttgggagtcagaattcaatcgtcgtaaagctgcctcattagaacaatcatta
gctgaagaagaaagattaaagaagttggccgaagaagaggcaatggccatagctgcagaa
aaagctttagctgtacaggaaaaaaatcgcactcttattgaacagcgtaaacgtgaaata
tcacgtctgaaagcagatagtgaattagctcagttaaagttgcctgaatctgcacgatgg
gcggcggctgctactagtaatataaatatcacaaacaaggctgctccaatagatttacga
tcaattcaagctgctcaagccgctgaagaggcaaaaagaaaatatcatgatgcattaatg
tctgaacaagttgctgtattgatagcagctgaagcagctccactatcaacaaaaacttca
ctttcatggtctcaaattgctaaatctgatacaatatctttaacatctatcaatccatgt
atttcaaaggatgataaaacaactgaacgttctaagtgtgctgttgttatatcatctaat
agtaataataatggtccaatacagaaatccactggtcattcatcaaatagtaataatact
tcatctttaacacaattggattatttaaaaatcacttcatcatcaaaaacatctttgaat
aacaacataacttctatttcttcttctacatctatctcatgtactccaaaagtgaataat
acaattattaactcagtgacgacaacaacaacaaatacaccttcaatatgggatctacct
gtaacaaataatctagataatactaacagtggaactgggaaaaaaggtagttcaaaaaag
aaaaaaaaaaatcgtgaagtttctttacttcctgctaaagaagaacttgctcattggtgt
gaatctcagctgtcttccattcctttatctggagttgatttacctactttagtggatttg
ttatgtgaactacaggctacagacgaaattttagaatttattgaaacttcattgggacga
tcaaagcgtataacacaattctctaaagattttttacaaaaacgttcattatttcgtcaa
taa
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