Schistosoma mansoni: Smp_096530
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Entry
Smp_096530 CDS
T01095
Name
(RefSeq) DEAD box ATP-dependent RNA helicase, putative
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
smm
Schistosoma mansoni
Pathway
smm03013
Nucleocytoplasmic transport
smm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Smp_096530
03015 mRNA surveillance pathway
Smp_096530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_096530
Enzymes [BR:
smm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Smp_096530
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
Smp_096530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
AAA_30
Motif
Other DBs
NCBI-GeneID:
8352838
NCBI-ProteinID:
XP_018646689
LinkDB
All DBs
Position
Unknown
AA seq
268 aa
AA seq
DB search
MSFTESENWIALLESVSRISKSSGAELDQESDEKPFTRAEISYLNKLLNSKLFETHDLDF
EILRSDPNHPLHSVRTFQELNLKEPLLKGIAAMGFYKPSTIQEQALSSLISDNPQNMIAQ
SQSGTGKTATFLLAMLSRINTDVHYCQCLCMAPTRELALQIESVGRQMAQFMPEVSFATA
VRSPRVKVDSNGYVTDQIVIGTPGTIANWFRGTGEHRIDPSKVVMFVLDEADIMIEEEGF
LNICMRVKKQVSGFIVFYFLYNSNRPFF
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttacagagagtgaaaactggatagcgcttctcgaaagtgtatcgcgaattagc
aaaagctcgggtgctgaactcgatcaagagtctgatgaaaaacctttcactagggcggag
atatcatacctcaacaagttgctaaattctaagctttttgagacgcatgacttggacttt
gaaatcttgaggtctgaccccaatcatcctcttcattccgttcgcacgtttcaagagttg
aacttgaaggaacctcttctgaaaggcatcgcagcgatggggttttacaaaccatccact
atacaagagcaagctttgagcagcctaatatctgacaacccacaaaatatgattgcgcag
tctcagtctggtactgggaaaacagcgacatttcttcttgctatgttgtcacgtattaac
acagatgtacattactgtcaatgtttgtgtatggcacctacgcgtgagttggccttgcag
atagaatcagttggtcgacaaatggcacagttcatgccggaggtatcttttgctacagca
gtccgttcaccacgtgtcaaagtcgattcgaatgggtatgtaactgatcagattgttatt
ggtactccgggtacaatcgcaaattggtttcgtggtacaggagagcatcgtattgatcca
tctaaagttgttatgtttgtattggatgaagctgacataatgatagaagaagaaggtttt
cttaatatatgcatgcgggttaaaaagcaagtcagcggatttattgttttctatttcctg
tataattctaatcgaccatttttttaa
DBGET
integrated database retrieval system
