KEGG   Schistosoma mansoni: Smp_097700
Entry
Smp_097700        CDS       T01095                                 
Name
(RefSeq) retinoic acid receptor RXR
  KO
K08524  retinoid X receptor alpha
Organism
smm  Schistosoma mansoni
Pathway
smm04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:smm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    Smp_097700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:smm03000]
    Smp_097700
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:smm03310]
    Smp_097700
Transcription factors [BR:smm03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    Smp_097700
Nuclear receptors [BR:smm03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   Smp_097700
SSDB
Motif
Pfam: Hormone_recep zf-C4
Other DBs
NCBI-GeneID: 8342391
NCBI-ProteinID: XP_018645908
UniProt: G4LXB9
LinkDB
Position
Unknown
AA seq 743 aa
MIMSIFANHDAIHMNHGVSDESVLYTHSYLIPPINQLENDILKPDQDMLTCVQSNRSHSP
SQQIYDMLDSTVLSDNPIQTIANSSCKSQTSLKSSSCDTSNADLGVDIKPSFMYNDNPQV
ISQSFLTDLHNHTDIHTVSSDTNPNLCPIANSINSTHLQELVYNTPQKFPHMLPPDAHQH
TVYSDNVVSEPFTRLLASGNSNETSTSYLPQVTKVETNSLTVSQSPILLFVDPNKTKPES
RECFPTQNPSELASQSSSATSVNTTNLNPICVICGDKASGKHYGVISCEGCKGFFKRTVR
KQLVYVCRESGQCPVDRRKRTRCQHCRFEQCLAKGMKKEAVQEERHRQPSSNPVPLISKP
PKSEKKGPGRRSTFGNKSAESIVTDQPPNINQDSTPNISITPTTTDCVQPNQVKSESSTT
CIQSNNVLLSDETDLPNLTLRCLLSAELSMDPKLAVSERGEAIYEDIPGDDDTGLHPLTI
ICQSIEQQLPRIVNWARQLPVFSSVYLSFDDQFCLIKAAWPELVLISSAYHSTVIRDGLL
LSIGRHLGREVAKSHGLGPLVDRILHELVARFRDLSLQRTELALLRAIILFNPDANGLSS
RHRVEAVREQLYSALHSYCTTNQPQDTSRFTKLLLRLPPLRSIASKCLEHLVFVKLAAED
PTSCRLINLVEHGVWPIQEKSFELATLPSDSASTDSVPSQITMVPTPQYIQHQDDNSLPT
SSHTDLSYTHTLPNFHTVQNYPF
NT seq 2232 nt   +upstreamnt  +downstreamnt
atgattatgtctatcttcgcaaatcatgatgcaattcatatgaatcatggagtctcagac
gaatccgttttgtatacacattcatatctaatccctccaataaaccaactggaaaatgat
attcttaaaccagatcaagatatgcttacatgtgtacagtctaataggtctcattcacct
agtcagcaaatatatgatatgcttgatagtacagttctttctgataatccaatccaaacc
atagcgaattcctcatgcaaatctcaaacatcactaaaatccagttcttgcgacacaagt
aacgccgatttaggtgtcgatataaaaccctctttcatgtataatgataatcctcaagta
attagccaatccttcttaacagatttgcacaatcatactgatattcatacggtttcttcg
gatactaaccctaatctttgtcccatagctaattcaattaacagtactcatcttcaggaa
cttgtttataacacgcctcaaaaatttcctcatatgttacctcccgatgctcaccaacac
actgtgtactctgataatgtagtatcagaaccattcactcgtctgcttgcttctgggaat
tcaaacgagacctccacatcttatttacctcaagttacaaaagttgagactaattctctt
actgtttctcagtcaccaattttgttgtttgtcgatcctaacaaaacaaaacctgagagt
agagaatgttttcctacacaaaatccttccgaactggctagtcagtcttcatcagctact
tctgtaaatacgactaatttgaatccaatttgtgtgatttgtggtgataaagccagtggt
aaacattatggtgtgatttcatgtgaaggatgtaagggattttttaaacgaacagtgcgt
aaacaattagtatatgtttgtcgggaatcaggtcaatgtcctgtagatagacggaagcgc
acacgttgtcagcattgccgtttcgagcagtgcttagcaaagggaatgaagaaggaagct
gttcaagaagagcgtcatcgtcaaccatcatcaaatccagtgcctttaatttctaagcca
ccaaagagtgaaaagaaaggtcctgggcgtcgttcaacatttggtaacaaatctgctgag
tcaattgttactgatcaacctccgaacattaatcaagattcaacacctaatatttctata
acccctaccactactgactgtgtacaacctaatcaagttaaatcagaaagttcaactacc
tgtattcaatctaataatgtactactatccgacgaaacagatctacctaatttaacatta
cgatgtttactgtcggctgaattaagcatggatcctaaattggctgtatcagaaagaggt
gaagcaatttatgaagatatacctggtgatgatgatactggtttacatccattgaccata
atctgtcagtctattgaacaacaattacctcgaatagttaattgggctcgtcagttgcca
gtgttttcatctgtctatcttagttttgatgatcaattttgtttaataaaagctgcttgg
cctgaattagttttaatcagctcagcgtatcattcaactgttattagagacggtttgctt
ttatcgattggacgtcatcttggtagagaggtggctaaatcacatggtctaggtcctctt
gttgatagaattcttcatgaacttgttgcacgttttcgtgatttatcgttacaaagaact
gaattagctttactacgtgctattattctttttaatcctgatgctaatggcttgtcatca
cgtcatcgcgtggaagctgtcagggagcagctttattcagctcttcattcgtattgtacg
actaatcaacctcaagatacttcccgtttcacaaaattactactaagattacctccttta
cgatccatcgcatccaagtgccttgaacatttagtatttgtcaaattagcagctgaagac
ccaacaagttgtcggttgatcaatcttgttgaacatggtgtttggcctatacaagagaaa
agttttgaacttgccacattaccatccgacagtgcatctacagactcagtgccaagtcaa
attacaatggtccctactcctcagtacattcaacatcaagatgataattcactaccaacg
agtagtcatactgatctctcctacacacacacattgccaaattttcatacagttcagaat
tatccgttttga

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