Schistosoma mansoni: Smp_097700
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Entry
Smp_097700 CDS
T01095
Name
(RefSeq) retinoic acid receptor RXR
KO
K08524
retinoid X receptor alpha
Organism
smm
Schistosoma mansoni
Pathway
smm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Smp_097700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smm03000
]
Smp_097700
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
smm03310
]
Smp_097700
Transcription factors [BR:
smm03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
Smp_097700
Nuclear receptors [BR:
smm03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
Smp_097700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
8342391
NCBI-ProteinID:
XP_018645908
UniProt:
G4LXB9
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All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MIMSIFANHDAIHMNHGVSDESVLYTHSYLIPPINQLENDILKPDQDMLTCVQSNRSHSP
SQQIYDMLDSTVLSDNPIQTIANSSCKSQTSLKSSSCDTSNADLGVDIKPSFMYNDNPQV
ISQSFLTDLHNHTDIHTVSSDTNPNLCPIANSINSTHLQELVYNTPQKFPHMLPPDAHQH
TVYSDNVVSEPFTRLLASGNSNETSTSYLPQVTKVETNSLTVSQSPILLFVDPNKTKPES
RECFPTQNPSELASQSSSATSVNTTNLNPICVICGDKASGKHYGVISCEGCKGFFKRTVR
KQLVYVCRESGQCPVDRRKRTRCQHCRFEQCLAKGMKKEAVQEERHRQPSSNPVPLISKP
PKSEKKGPGRRSTFGNKSAESIVTDQPPNINQDSTPNISITPTTTDCVQPNQVKSESSTT
CIQSNNVLLSDETDLPNLTLRCLLSAELSMDPKLAVSERGEAIYEDIPGDDDTGLHPLTI
ICQSIEQQLPRIVNWARQLPVFSSVYLSFDDQFCLIKAAWPELVLISSAYHSTVIRDGLL
LSIGRHLGREVAKSHGLGPLVDRILHELVARFRDLSLQRTELALLRAIILFNPDANGLSS
RHRVEAVREQLYSALHSYCTTNQPQDTSRFTKLLLRLPPLRSIASKCLEHLVFVKLAAED
PTSCRLINLVEHGVWPIQEKSFELATLPSDSASTDSVPSQITMVPTPQYIQHQDDNSLPT
SSHTDLSYTHTLPNFHTVQNYPF
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgattatgtctatcttcgcaaatcatgatgcaattcatatgaatcatggagtctcagac
gaatccgttttgtatacacattcatatctaatccctccaataaaccaactggaaaatgat
attcttaaaccagatcaagatatgcttacatgtgtacagtctaataggtctcattcacct
agtcagcaaatatatgatatgcttgatagtacagttctttctgataatccaatccaaacc
atagcgaattcctcatgcaaatctcaaacatcactaaaatccagttcttgcgacacaagt
aacgccgatttaggtgtcgatataaaaccctctttcatgtataatgataatcctcaagta
attagccaatccttcttaacagatttgcacaatcatactgatattcatacggtttcttcg
gatactaaccctaatctttgtcccatagctaattcaattaacagtactcatcttcaggaa
cttgtttataacacgcctcaaaaatttcctcatatgttacctcccgatgctcaccaacac
actgtgtactctgataatgtagtatcagaaccattcactcgtctgcttgcttctgggaat
tcaaacgagacctccacatcttatttacctcaagttacaaaagttgagactaattctctt
actgtttctcagtcaccaattttgttgtttgtcgatcctaacaaaacaaaacctgagagt
agagaatgttttcctacacaaaatccttccgaactggctagtcagtcttcatcagctact
tctgtaaatacgactaatttgaatccaatttgtgtgatttgtggtgataaagccagtggt
aaacattatggtgtgatttcatgtgaaggatgtaagggattttttaaacgaacagtgcgt
aaacaattagtatatgtttgtcgggaatcaggtcaatgtcctgtagatagacggaagcgc
acacgttgtcagcattgccgtttcgagcagtgcttagcaaagggaatgaagaaggaagct
gttcaagaagagcgtcatcgtcaaccatcatcaaatccagtgcctttaatttctaagcca
ccaaagagtgaaaagaaaggtcctgggcgtcgttcaacatttggtaacaaatctgctgag
tcaattgttactgatcaacctccgaacattaatcaagattcaacacctaatatttctata
acccctaccactactgactgtgtacaacctaatcaagttaaatcagaaagttcaactacc
tgtattcaatctaataatgtactactatccgacgaaacagatctacctaatttaacatta
cgatgtttactgtcggctgaattaagcatggatcctaaattggctgtatcagaaagaggt
gaagcaatttatgaagatatacctggtgatgatgatactggtttacatccattgaccata
atctgtcagtctattgaacaacaattacctcgaatagttaattgggctcgtcagttgcca
gtgttttcatctgtctatcttagttttgatgatcaattttgtttaataaaagctgcttgg
cctgaattagttttaatcagctcagcgtatcattcaactgttattagagacggtttgctt
ttatcgattggacgtcatcttggtagagaggtggctaaatcacatggtctaggtcctctt
gttgatagaattcttcatgaacttgttgcacgttttcgtgatttatcgttacaaagaact
gaattagctttactacgtgctattattctttttaatcctgatgctaatggcttgtcatca
cgtcatcgcgtggaagctgtcagggagcagctttattcagctcttcattcgtattgtacg
actaatcaacctcaagatacttcccgtttcacaaaattactactaagattacctccttta
cgatccatcgcatccaagtgccttgaacatttagtatttgtcaaattagcagctgaagac
ccaacaagttgtcggttgatcaatcttgttgaacatggtgtttggcctatacaagagaaa
agttttgaacttgccacattaccatccgacagtgcatctacagactcagtgccaagtcaa
attacaatggtccctactcctcagtacattcaacatcaagatgataattcactaccaacg
agtagtcatactgatctctcctacacacacacattgccaaattttcatacagttcagaat
tatccgttttga
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