Schistosoma mansoni: Smp_099630
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Entry
Smp_099630 CDS
T01095
Name
(RefSeq) fragile X related 1, frx1
KO
K15516
fragile X mental retardation protein
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_099630
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
Smp_099630
Factors involved in mRNA localization
Other mRNA localization factors
Smp_099630
mRNA cycle factors
Stress granule specific factors
Smp_099630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_9
Agenet
Motif
Other DBs
NCBI-GeneID:
8351166
NCBI-ProteinID:
XP_018649929
UniProt:
G4VBN1
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All DBs
Position
2:complement(10290017..10298192)
Genome browser
AA seq
598 aa
AA seq
DB search
MIQLEVCIPVEVEGKYGEFYPGVINGLKSLEELNVTLLDSSHSKALVEFTLPPSSLRLPP
KDPGTVLEPVQGLEVDVLISSSPGEPSVDHEQPSDAIASKLSAWWPAVVRKIGGSFVIVE
LMADFSSENAGPNEVIVLPNKRISVPHPSSLEKTDIVEKHQLRPRVHHPNLSVSSFHIHA
IDIPDELAPYCKEPANYHHFARRCGLPVLITLAPDTFKPVSPVIKGDSETYNLKSRLLVI
STDVSTINRASVIDNTFVDMLRQKVSILQQTEELSKKLVASRLNQQSPFVEEFLIPLDLI
HYAIGAQGSNIRRASAIEGVLSVKLDRQTGNIRISGKTQDAVKNAKKLLDFSQDIFQIPK
SYVGPILGSGRRHVQHIVDRVGLVGIKISKSPEDDREHVSFQLTGTQQAIRDTQLFLEFQ
VASLQELDRLRGVENPPSILKPKNATIPLEDISSNDESSNHLTHSENGHRISNGDNQSSK
CSESNYAVHSNSCSNKEEPKKQETTYNNIANSRPHPGGRQPKPRSQVNHTRPDPRQIPPI
QRGGGESVRNSGSNHTGVSKSSANHVNSKNPNQQRNQPNHRSDSMGPRGQNMCAPIVS
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgattcagttggaggtctgcataccggtagaggtggagggcaaatatggagagttttac
cccggtgtcattaatgggttgaaatctctagaagaacttaatgtgacactattagattct
tcccactcgaaagcccttgtggaattcactctccctccttcctcgttgcgtctacctcca
aaagacccaggaacggtcttagaaccagttcaaggactagaggttgatgtgttaatcagc
tcctctcctggcgagccatctgtagatcatgagcaaccaagtgatgcaatcgcctctaaa
ctttctgcctggtggcctgctgtcgtaaggaaaattggtgggagttttgttattgtggag
ttaatggctgacttctcctctgagaatgctggtccaaatgaagtaattgtccttcccaac
aaacgcattagtgtccctcatccgtcatcacttgagaaaacggatattgttgaaaagcac
caattgaggccacgagttcatcatcccaatcttagcgtctcatcctttcacatccatgcc
atagatataccggacgagttagctccatattgcaaagagcctgccaattaccatcatttt
gctcgaagatgtggtttgcctgtcctgatcaccttggcacccgatacttttaaaccagtg
tccccagttattaagggggatagtgagacgtacaacttgaagtcccgtttgcttgtaatt
tctacagatgtctccacaatcaacagagcatcggtcatcgacaacacgttcgttgatatg
ctgcgacaaaaagtatccattttgcaacaaactgaagaactatctaaaaagttggtggcg
tctcgtcttaatcagcaatcaccattcgttgaagaattcctcatacccctggatttaatt
cattatgcaattggtgctcaagggtcaaatattagacgcgctagtgctattgaaggtgta
ctctcagtaaagttagatcgccagaccggcaatatcaggatttctggaaagacacaagac
gctgttaaaaacgcgaagaagttattggacttctctcaagacatcttccagatacctaaa
tcatatgtaggtcctatcttggggtcaggtcgtcgacacgtccaacatatcgtagatcga
gtaggacttgttggaatcaaaatttctaaatcacctgaagacgatcgtgagcatgtttca
tttcagttaacggggactcaacaagccatacgtgatacacagttatttttggaatttcaa
gtcgcaagcttacaggagttagatcggcttcgtggtgttgagaatccaccgtctatacta
aaacccaagaatgcgaccattccacttgaagatatttctagcaatgatgagtcttcaaat
catctcacacattctgaaaacggtcatcgtatatcaaacggtgacaatcaaagttcgaaa
tgcagtgaatctaactatgctgtacattcaaatagttgctcaaataaggaggaaccgaag
aaacaagaaactacttataacaacattgcaaattcacgtccacatcctggcgggcgtcag
cccaaaccgagatctcaagtcaatcacacaagaccagatcctcgtcaaattccccccatt
caacgaggtggtggtgaaagtgttcgcaacagtgggagtaatcatacaggtgtttctaag
tcttcagccaaccatgttaactccaaaaaccctaatcagcaaagaaatcaaccgaatcat
cgttcggattccatgggacctagaggacaaaacatgtgtgccccaattgttagctga
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