Schistosoma mansoni: Smp_099870
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Entry
Smp_099870 CDS
T01095
Name
(RefSeq) putative elongation factor 1-alpha (ef-1-alpha)
KO
K03231
elongation factor 1-alpha
Organism
smm
Schistosoma mansoni
Pathway
smm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Smp_099870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_099870
03016 Transfer RNA biogenesis [BR:
smm03016
]
Smp_099870
03012 Translation factors [BR:
smm03012
]
Smp_099870
04131 Membrane trafficking [BR:
smm04131
]
Smp_099870
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smm04147
]
Smp_099870
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
Smp_099870
Transfer RNA biogenesis [BR:
smm03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
Smp_099870
Translation factors [BR:
smm03012
]
Eukaryotic type
Elongation factors
Smp_099870
Membrane trafficking [BR:
smm04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
Smp_099870
Exosome [BR:
smm04147
]
Exosomal proteins
Proteins found in most exosomes
Smp_099870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
8351197
NCBI-ProteinID:
XP_018649304
UniProt:
G4VAD2
LinkDB
All DBs
Position
1:complement(56478852..56480430)
Genome browser
AA seq
465 aa
AA seq
DB search
MPSDKEHINIVVIGHVDSGKSTTTGHLIFKCGGIDKRAIEKYEKESGEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFDTQNYKVTVIDAPGHRDFIKNMITGTSQADCAMLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIIAINKMDCTEPPFSEDRYKEIVKEVSGYIKK
VGYNPATVPFVPISGWHGDNMIEKSTNMPWFKGWEITRTKDGKTVTDTGFTLLEALDKME
PPARMTDKPLRIPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQGLSTEVKSVEMHH
EALTEALPGSNVGFNVKNVAVSEIHRGNVAGDSKNDPPKEAESFMAQVIVMNHPGEIKNG
YSPVLDCHTAHIACKFSEITEKLDRRSGKKTEDNPKCIKNGDAANILLVPNKPLCLETFQ
QYPPLGRFAVRDMKQTVAVGVVKSVTKKESAAKVTKSAAKVAKKK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgataaagaacatattaacatagtggttattgggcatgtagatagtggaaaa
tccactactaccggacatctcattttcaaatgcggtggcattgacaaacgtgctattgaa
aagtatgaaaaagagtctggagagatgggtaaaggttctttcaaatatgcttgggtattg
gataaactgaaggctgaacgcgaacgtggtatcacgatcgatattgcgctgtggaagttc
gatacccaaaattacaaagtcactgttattgatgcacctgggcatcgtgacttcatcaag
aatatgatcacaggaacaagtcaagctgactgtgcaatgctgattgttgcggctggtgtt
ggtgagtttgaagctggtatttccaaaaacggtcagacaagagaacatgcattgctggca
tacacattgggtgtcaaacagttgatcatcgccatcaacaaaatggactgcacagaacct
cctttttctgaagatcgctacaaagaaattgtcaaagaagtatccggctatatcaaaaaa
gttggttacaatcccgccacagtaccatttgtaccgatctctggctggcacggtgataat
atgatagaaaagagtacaaacatgccgtggtttaaaggttgggagataacaagaacaaag
gatggaaagactgttactgatacaggcttcacattgctagaagctttagataaaatggaa
cccccagcaagaatgactgataaaccactcagaattcccttgcaagatgtttacaagatt
ggtggtattggtacagttcccgttggtcgcgttgaaactggtatcatcaagcctggtatg
gtcgtcacttttgctccgcaaggtttgtcgactgaagtcaagtctgtcgaaatgcatcat
gaagcacttactgaggctctccctggtagcaacgttggattcaacgttaagaacgtcgca
gtcagtgaaatccaccgtggtaacgttgcaggggattctaaaaacgatcctcctaaagaa
gctgaaagcttcatggcacaagtaattgtcatgaaccatccaggtgagatcaagaatggc
tattctccagtccttgattgtcacactgcacacattgcttgcaaatttagtgaaataacg
gagaagcttgatcgacgttcggggaagaagactgaagacaacccaaagtgcattaaaaat
ggcgatgcagctaacatattactcgtgccaaataagcccttatgtttagagacattccag
caatacccaccactcggtcgctttgccgttcgagatatgaagcaaacagtggctgtcggt
gtcgtcaaatctgtcaccaagaaagaaagtgctgctaaagttaccaaatccgccgcaaag
gttgcaaagaaaaagtaa
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