Schistosoma mansoni: Smp_102690.2
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Entry
Smp_102690.2 CDS
T01095
Name
(RefSeq) eukaryotic translation initiation factor 2c,putative
KO
K11593
eukaryotic translation initiation factor 2C
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_102690.2
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_102690.2
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
Smp_102690.2
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
Smp_102690.2
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
Smp_102690.2
microRNA pathway
RISC loading complex
Smp_102690.2
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
HCV_NS5a_C
ArgoL2
Motif
Other DBs
NCBI-GeneID:
8344890
NCBI-ProteinID:
XP_018644463
LinkDB
All DBs
Position
Unknown
AA seq
924 aa
AA seq
DB search
MEEGSSNTSSRGGRRKRHQKSRTSKQPISESQQTQQSGDHEQSSIPPSVQEAPVTSSLGD
EPSVIDVFPSTSKLTSPPSKAAKQKKKHLKVVETVHLSEDLSKMSIRRFSIPNRPDGGGK
LGKEIYVTVNCWDFSIKPKIVYMYRAEALAVYRGDEGNRTEIRMSAKDKRALIKQVADSL
HDCIIYDGGHDIYSADRLPGIGKVPTEAEMKIVDPLGRDNLVLKYHLMEVQTVSTDDVQQ
YVENPKATSLNIPQESIRLLDCILRTVSKQSLISLGRSALFYDKPVKVIADKLFSIHRGF
IASIRPQWKVRVNLDMTYKAFFRAGNLADVMYEKYGDNIARCSSQMAHDLRRIRVETDKF
YKNENGDVYSRRFTVHGISSVPADKLMIEERKQSIAAYFDEHHHIKLKYPDLPCVKVDQK
REVYMPMEQLNILPFQAPNASKADVASEVIRCAAVRPQERFRELVNFTNTISKEHRLFQL
FQAKIANQPVDVKSRVLQPPKAIFNRPDKIQLKAGSWNTPDFHEPARHGVAIPWGILCVP
NNPRSKGDVEKVTNELPKAANRFGVFLSNKPLISQCYVNQLEKKFEEFHRQGCNFIMLIL
YDDLAYGTIKRLSDLKMGIRTQCVRGSTLRKPNVFPNLLLKLNGKLGGVNWIVPDLTEYS
KDLIMVFGADVTHPAPTQTHQVLKSVAAVVGSVSPELMRYGAIVRQQATTERGNKTTREI
IDNLHLSVGELLTLYLRNTKGRFPKRIIFYRDGVSEGQFENVLVEELSAIQKACSDIRPG
EEPAITFIVVQKRHHIRLKPQDPRARNVEPGTVVDTDITHRREFDFYICSHEGIQGTSKP
SHYHVLYDDSNFTSDSLQMFTYHLCYAYMRCSRSVSYPAPVYYSHLAAFRARDWLSNTNE
ASVLLDDYDRFKVHISQTDGMFFL
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaggtagttcgaatacgagttctcgcggtggtcggcgtaaacgtcatcagaaa
tctcgaacttcaaagcagccaattagcgaatctcaacaaactcaacagagtggagaccat
gaacagtcttcaattccaccaagtgtacaagaggctcctgttacgtcttcgttgggtgat
gaaccttctgtgattgatgtttttccttcgacatcgaaactaacaagtccaccttccaag
gctgctaaacagaaaaaaaaacatctaaaagtagtagaaactgttcatctttctgaagat
ttatccaaaatgagtatcaggagattttcaatacctaatcgaccggatggagggggaaag
ttgggcaaagaaatttatgtgactgttaattgttgggatttttcgataaagcccaaaatt
gtttacatgtatcgagcagaagctctcgctgtatatcgtggtgatgaaggaaacaggact
gaaatacgaatgtctgctaaggataaacgtgctctaattaaacaggtggctgatagctta
cacgactgtataatttacgatggtggccatgacatatactcggcggatcgtttgccaggg
atcgggaaagttcctactgaggcggaaatgaaaattgttgatccacttggtcgagataat
cttgttctgaaatatcacttgatggaagtacagacggtatcaactgacgatgtgcaacaa
tacgtagaaaatccgaaagcaacgtcgttaaacatcccccaagaatctataagattgtta
gattgtatattgagaactgtgtcgaagcagtcgttaatatctcttggaagatctgcttta
ttttacgacaaaccagtgaaagtcattgcagataaactattcagtattcacagaggtttc
atcgctagtattagaccacaatggaaggtccgcgtcaatttggacatgacctataaggct
tttttcagagctggtaacctagcagatgttatgtacgagaaatatggagacaatatagcc
agatgtagttcacaaatggctcacgatttaagaagaatacgtgttgaaactgacaagttc
tacaaaaatgaaaatggggatgtgtattctagacgtttcactgtgcatggaatatcgtct
gtgccagctgacaagcttatgatcgaggagagaaagcaatctattgctgcatattttgat
gagcatcaccacatcaagttaaaatatcctgatctaccgtgcgtgaaggttgaccaaaaa
cgagaagtttacatgccaatggaacaactcaatattcttcctttccaagcacctaacgca
agcaaggctgatgtggctagtgaggttatccgttgtgcggcagttcgtcctcaagaacgt
ttccgagaacttgtgaatttcactaatacgatttcaaaggaacatcgactatttcagttg
tttcaagcaaagatagcaaaccaacccgtagatgtaaagtcacgtgtactccagccaccc
aaagcaatttttaatcgtccagataaaatccaactgaaggctggaagttggaatactccg
gattttcatgaaccagctagacatggtgttgcaattccatggggaatactttgtgttcca
aacaacccgcgatctaaaggcgacgtggaaaaagtcacaaacgaattaccaaaggccgct
aaccgtttcggtgttttcctcagcaataaaccacttatatcacaatgctacgttaaccaa
cttgaaaaaaagtttgaggaatttcatcgacaaggttgtaacttcattatgttgattcta
tacgatgatttggcctacggaacaatcaaacgtctaagtgatttgaaaatggggatccgc
acacagtgtgttcgtggtagcactctacgcaaacctaatgtgtttcccaacctattattg
aaactcaatgggaaacttggtggtgttaattggattgtcccagatcttactgagtacagc
aaggatttaataatggttttcggtgctgatgttactcacccagcaccgacacaaactcat
caggttctcaagtcagttgctgccgttgttggatctgtcagtcctgagttaatgcgatac
ggggctatagttagacaacaagcgactactgaacgaggaaacaaaacaacgagagaaatt
attgataacttgcatctgtcagttggagaactgctcacgctgtatttgcggaatacgaag
ggacgttttcctaaacgtattatattctatcgcgacggtgtctcagagggtcagtttgaa
aatgtcttggtcgaggagttatctgcgattcaaaaagcttgcagtgacattcgtcctggt
gaagaacctgctattacatttatcgttgtccagaagcgacaccatatccgattaaaacca
caagatcccagggcacggaatgtggaaccaggaaccgttgttgatacagatattactcat
cgtagagaattcgacttctatatttgttctcatgaagggattcagggaacatcaaaaccg
tcccactatcacgtattatatgatgacagtaactttacatcggacagtcttcaaatgttt
acgtaccacttatgttatgcttatatgcgatgctctcggagtgtctcttaccctgcccca
gtgtattattctcatttagctgcgtttcgtgcccgagattggctatcaaacacgaacgaa
gcaagtgttttacttgatgattatgatcgcttcaaagttcacatttcacaaactgatggg
atgtttttcttgtga
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