Schistosoma mansoni: Smp_105860
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Entry
Smp_105860 CDS
T01095
Name
(RefSeq) putative nuclear protein SkiP
KO
K06063
SNW domain-containing protein 1
Organism
smm
Schistosoma mansoni
Pathway
smm03040
Spliceosome
smm04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Smp_105860
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
Smp_105860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smm03041
]
Smp_105860
Spliceosome [BR:
smm03041
]
Complex B
Other components
Prp19-related factors
Smp_105860
Complex C
Smp_105860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
8342971
NCBI-ProteinID:
XP_018651028
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All DBs
Position
3:complement(11569232..11571287)
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AA seq
540 aa
AA seq
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MPGSLQLPAPIQKGSDDYGTALNLNVGSRVLVAKSTIPPYGHRKNWVPRNQEDFLDGGAF
PEIHVPQYPLGMGQEKNISNALVIKTDKDGRIRYDELVRQGHSKDRIIYSKFSDLLPKPI
DDDDPEFNKPSQETIEETTEKTRKALESLVEMKVAAAAPVRRAEKTNPAEYIRYTPSQQG
AAFNSGAKQRLVRMVEMQKDPMEPPKFKINQKIPRGPPSPPPPLMHSPARKVTVKEQQDW
KIPPCISNWKNPRGYTIPLDKRVAADGRGLQTVHINENFAKLAEALYTADRKAREAVEMR
AQIERKVAQKEKERKEEQLQRIAQQARESRAGLRRPGATEGGDNDPELMDREELRRDRAR
DRARERNLARSNNEAKAKIEKDKERDISEQIALGLPNPRFNSTNESLFDQRLFNQSKGLD
SGFEGGADDLYNIYDKPWRGDSELVNHIYRPRQKDTDAYGTDLDALKKTKRFVPDREFSG
TDHSRRLDGPVQFERDEEDPFNLSKFLSKVKKAEKRPGEGTSGTDISNRDTTHRKRDRKD
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgccaggtagtttacaactcccagctccaattcaaaagggttcagatgattatggaact
gctttaaacttgaatgtgggttcgagagtcctcgttgcaaaatcaaccatcccaccgtac
ggacaccggaaaaactgggtaccacgcaatcaggaggattttttagatggaggagcattc
ccagaaatacatgttccccaatatcctctcgggatggggcaggagaaaaatatttcgaat
gctttggttataaagactgataaagatgggagaatcagatatgatgaacttgttcgtcaa
gggcacagcaaagacaggatcatctattcaaagttttcagacttactacctaaaccgatt
gatgatgacgatccagaattcaacaaaccaagtcaagaaactatcgaagagacaacagaa
aaaacacgtaaagctctagaatcactggtcgaaatgaaagttgctgctgctgcacctgta
cgccgagctgagaaaacaaatcctgctgaatatatccgttatacaccatcacaacaaggt
gctgcttttaatagtggagctaaacaacgcctcgtcagaatggtggaaatgcagaaagat
cccatggaaccccctaagttcaaaattaaccagaagatccctcgcgggcccccttctccc
ccaccacctctgatgcattctccggcacggaaagttacagttaaagaacaacaagactgg
aaaatccccccatgtatttcaaactggaagaaccccaggggatatactataccgttagac
aaacgagttgctgcagatggtcgtggtctccaaacagttcatattaatgagaactttgcg
aaactagcagaagcactttatacggctgacagaaaggctcgtgaggccgtagaaatgaga
gcacaaatcgaaagaaaagttgctcagaaagaaaaggaacgaaaggaggagcaactccag
aggatcgctcagcaggctcgcgaatctcgagcaggtcttcgtcgtcctggcgcaactgaa
ggcggagacaatgatccggaactaatggaccgagaagaattaagacgtgatcgtgcacga
gaccgtgctagagaaagaaatcttgctcgttctaataatgaagccaaggctaagattgaa
aaagacaaagagcgagacatcagcgaacaaatcgcacttggacttccgaatccacggttt
aactcaacaaacgaaagcctattcgatcaaagacttttcaatcaatctaagggtctagac
tcaggttttgagggaggtgcggatgatttatataacatttatgataagccatggagaggt
gattctgaattggtaaatcatatataccgcccacgccaaaaagatactgatgcatatggg
acagaccttgatgcacttaagaagactaaacgctttgttcctgaccgtgaattttctgga
actgatcattctcgtcgtttggatggtccagttcaatttgaaagagacgaagaagatccc
tttaatcttagtaaattcttatccaaagtcaagaaggccgaaaaacgcccaggtgaaggt
acctcgggaacagacatcagtaatcgtgacactactcatcgtaaaagagatcgaaaggat
taa
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