Schistosoma mansoni: Smp_105970.1
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Entry
Smp_105970.1 CDS
T01095
Name
(RefSeq) hypothetical protein
KO
K18743
caprin-1
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_105970.1
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
Smp_105970.1
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MG280
CoV_S2
Motif
Other DBs
NCBI-GeneID:
8342980
NCBI-ProteinID:
XP_018651018
UniProt:
G4VEP8
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Position
3:11237086..11240797
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AA seq
517 aa
AA seq
DB search
MLECDSPCELVRQFLSNLERRQRNLGKRKSKLDGYREKLQKGEVLKDEQKKAVESYDGVV
QNISFVQEIVAQTKDLLSNMESVVGKQMSQLEAEHEKYTLSYLSIHMCLERFFASLDIPT
VRSAVTKSSSENNLKLLDAVRDILTPPVVDNWPGVSSSALSSVPNFLRAREDLKTVATST
FNLMNGNSVPVPLSNDLEDFRKKHTTYKDIRNLCFRLLSNPLVQQSMGLISDSSTTVVPE
PTQVVADSETNSPTGLSGPTDVPTVPYNEFTTIGGHSSVTTSDEPVDQVIRPLNSTFNFI
QASRVDHSHITAEPPTNYEDVMPVNQLPNKTSVSCFSNHSIEDNIDRSLVTRIDQQYVLN
IPEVEHSKIELFGRSSSSLSPDNVNQTTSFKSILSQDEHETNINVHKPISYADSVRRAGQ
VHTGFNRPAVVDNINSKKTDRTMDENSRESEQPDSNFQHGNPKVGLRGRIPNENRGRGSG
GPRRNTGQRGGGGNFGAHPGRGGAHRGMTTAFAQPTY
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagtgtgattctccatgtgagttggttagacagttcttgtcgaatcttgagcga
agacaaaggaatcttggaaaaagaaagagtaagctagatggttatcgcgaaaaactgcag
aaaggtgaagtcctgaaagatgaacaaaagaaagccgtcgaaagctatgatggtgtggtt
cagaacatctcgtttgtacaagagattgtggcacagacgaaggatctcttgtcgaatatg
gagtcagtcgttggtaagcaaatgtcccaactggaagctgaacatgagaaatatactctt
tcgtatttaagtatccacatgtgtttggaacgtttttttgcttctttggacattccgaca
gtccgttcagccgtcacaaaatcttcatcagaaaacaaccttaagttgttagacgccgta
cgagatatattaacaccgcccgtagtggataattggcctggagttagttcttcagctcta
tcttctgttcccaatttcttacgtgcacgagaagatcttaagactgttgctacaagcacc
ttcaatttgatgaatgggaattcagtacctgtcccactgtcaaacgatttagaggacttt
cgaaagaagcacacaacttacaaggacattcgcaatttgtgcttccgactactgtctaac
ccactcgtccagcaatcgatgggtcttattagtgatagcagcacaacggttgtaccagaa
ccaacacaagttgttgcagattcggaaactaactcacctaccggcctatcaggtcccact
gatgtgcctactgttccctataatgaattcacaacaattggtgggcactcttctgttaca
acttcagatgaaccggtggatcaagtcatccgaccactcaatagtacgttcaactttatc
caggcttctagagtcgaccattcgcatatcacggccgaacctccaacaaactatgaagac
gttatgcctgttaatcaattacctaataaaacgagtgtttcttgtttcagtaatcatagt
attgaagataacattgaccgttctttggttacaaggatagaccaacaatatgttttaaat
attccagaagttgaacactcaaagattgaattattcggaagaagttcatcatctttgtca
ccggacaatgtcaatcaaactacatcttttaaatcaatattatctcaggatgagcatgag
acaaatatcaatgtacacaaaccaatttcatatgcggattctgttcgaagagccggacaa
gtacatacaggttttaatcgaccagcagtcgtagataatataaactctaaaaagactgac
cgcacgatggatgaaaactctcgtgagtccgaacaacctgattcaaatttccagcatgga
aatcccaaagttggtttacgtggccgtattccaaatgaaaatcgaggccgtggaagtggt
ggtccaagacgcaatacaggtcagcggggcggtggtgggaatttcggtgcccatccaggt
cgtggtggcgctcatcgaggaatgactactgcatttgctcagcctacttactaa
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