Schistosoma mansoni: Smp_123060
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Entry
Smp_123060 CDS
T01095
Name
(RefSeq) rgpr-related
KO
K20353
COPII coat assembly protein SEC16
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smm04131
]
Smp_123060
Membrane trafficking [BR:
smm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
Smp_123060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
8343851
NCBI-ProteinID:
XP_018652912
LinkDB
All DBs
Position
6:complement(1783645..1817909)
Genome browser
AA seq
1407 aa
AA seq
DB search
MSSPQMTYYGGYPVNHDQMQSSHFGYDHNPFNNPPNFSSNQDAEQPPINTFPASNSHPEL
GVKSEEPTDFPVNSSISGNNSTNNQNIVNSSPSYGCKPEFLANSVDNALQGAGLSKNDNA
IPPKIGKVSRSTHRPKLPQQTLTSSRSTQKIHSKSRTKTTHQEVSTESSSKDVQQFDPFA
QWHQIMLQYYSQFYPAYQIAPPQVLPQQSTARLSTNNSSKTPASHSLNPTIKHGPEGFQV
PSVNQTVPFDYANYYYQCYAAAAQFWSGGHPYQFFGTGIPETPHFYNTPHIKAWISCPGV
IVQVLPSRPRNGEFARVEIINLFELVNEAVADAKRRASDNTTHTCDSEFSQQQPSEQNRT
SRLGQYPENTLFNITDSGMQTPSQLSSIDIGGAEDDGEEIRACVMAAACWNQAEHQVYPG
PLNRVGTLKADVLAFLREKLTEIQDRLPIDWESAGLLLMFLETLVKNNGNLQTSDLVNLL
LEGHKPTTDSFRSGSYGYSSSSYLGVQVPVQYTGTLNNYNHQVGEYINESLASLPGSQVT
SGRESPESHFKIDYGSSLLQHSKAASETGRMSSVQNIIRRMGGVHIGERGLRSQESEGKL
LDRFRELLMHGLPMKALEHACRSKLWGHAFTLAHRMGPSTFAKVMDRFLNNDISLSDPIL
TLYQLTAGEMPQSINTAAYGRGIDNGDWRPHLAMILAGHSSQSDLSLLALERLGDGLLSR
KHVYAAHLCYLLMNSLKNIDDKQREFRLPGKIWLIGVPPNHITSSGDVINNTSDEFQEDN
IASNHILSPLFATSEAIQLTEIYEYSIQLANRKFHLRQLMPFRLVYAIRLLDAGFIEKAY
RYLTAIGNEILTEFDEGIYQLKHPFVCNNDHNNNNTYVDPLLYSLINNCLRLAEPLQYHP
EIESFDLLQSSTNSQLMDDYSFGFQFKNSSYSMPVQNKNKNWIERLNQIFNQMNQKIDHP
RYKPSVIKSRENPSKDVRFTNEANEATEYSDHNDFNHYHQSSQPLQQQQQQQQQPLQQQQ
QQRQYHQFNKESNYKPSVEYRSNIQTLDSSSFLSTDNRDQRKLFSHEPFNQQSPSSLSSA
PSHEYSYQSEPYNQLSSHSTSNLIQHNDNIQHNYSMNSPVQLSNYPMSLQSNQSINSVTV
SKSSSSSSSVTTTLNEMSSSIFMPINHQTDSQLIINNDNNSLNYSTLSNQQPFDYFANIQ
SIHSRSRTVSGNSENNTVNMTNSTTVDQLDPSSNNRSLLSTKYETSFTNEHHFQQQSKQS
ISNLSQMNYLPQPSRHPSSMMNDNLKDYHNTFSTPTTATTSTTNSNHNSSNERFTQDKSN
DLDNLDKNEQQSKDGWLSGWFGRLKKNGPKNIHLPDDSKPSIVWDDRLKQWIDVNDPDGS
ESNKVPPPPPAPASSFIMQKNDDSSMS
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcctcaaatgacttattatgggggatatcctgtaaatcacgatcaaatgcaa
agttcccatttcggttatgatcataatcccttcaataatccaccaaactttagctcaaac
caggatgccgaacaaccgcctataaatacatttcctgcctccaattctcaccccgaacta
ggtgttaagtccgaagagcctacagattttcccgttaattcttcaataagtggaaacaat
agtacaaataaccagaatattgtaaacagttcacccagttatggctgcaaaccagagttt
ttggccaatagcgttgataatgcacttcagggagcaggactatcgaaaaacgacaatgca
atacctccgaaaataggaaaagtcagtcgttcgactcatcgacccaagttacctcagcaa
acacttacatctagtagaagtactcagaaaattcattccaagtctagaaccaaaacaacc
catcaagaagtgtccaccgaatcttccagtaaggatgtgcaacaattcgatccttttgct
cagtggcatcagattatgttgcagtactacagccaattttatccagcgtatcaaatcgcc
ccgccacaggtgctacctcaacaatctaccgctcgcctttctacgaataattcatcgaaa
acccctgcaagtcattcacttaatcctactataaaacatggacctgaaggatttcaagta
ccatctgtaaatcaaacagtaccatttgactatgcaaactactactatcaatgttacgct
gcagctgcacaattttggtctggtggtcatccatatcaatttttcggaacaggtattcct
gaaactccacatttttacaatactccacatataaaggcttggattagttgtcctggcgtt
attgttcaagttttaccttcaaggccaaggaatggagaatttgctagagttgaaataatt
aatctgtttgagcttgtcaatgaagctgtggctgatgcaaagagaagagcatcagacaac
actacacacacttgcgactctgaatttagccaacaacaaccatccgaacaaaataggact
tcgcgactcggacaatatccagaaaatactctttttaatataactgattccggaatgcaa
acaccaagtcaactctctagtattgacattggaggtgctgaagacgatggtgaagaaata
cgtgcctgtgtcatggctgctgcatgttggaatcaagcggagcatcaggtttatccagga
ccattaaatcgtgtaggtactctgaaagccgatgtacttgctttcttacgtgaaaagctt
acggaaattcaagatcgcctacctatcgattgggaatctgctggcctactactaatgttt
cttgaaaccttggttaaaaataatggtaatctgcagacatcagatcttgtaaatctttta
ctggaaggacacaaaccaactaccgatagttttcggagtggttcctatgggtattcttct
agttcttatctaggagttcaggtacctgtacaatatacaggtactttaaacaattataat
catcaggttggggaatatataaacgaatcgttagcttcgttacctggaagtcaagttaca
agtggtcgagaaagtcctgaatcacatttcaaaatagactatggaagtagtttattacaa
cacagcaaggcagcttcagaaactggaaggatgagttctgttcaaaatattattcgacgt
atgggaggagttcatataggtgaaaggggattgcgcagccaggagtcggaaggcaaactt
ctggatcgttttcgtgaattgttaatgcatggcttaccaatgaaagcgttagaacatgct
tgtcgttctaaactatggggtcatgcatttacattggctcatcggatgggtccttcaaca
tttgctaaagtaatggatcgttttctaaataatgatatatcattatcggatcctattctt
acattgtatcaattaactgctggagaaatgccacaatctattaatacagcggcttatgga
cgaggcatagataatggtgattggagaccgcatttagctatgatattggctggtcactca
tcacaatccgatttatcacttttagccttggaacgtcttggtgatggtttactatcacga
aaacatgtttatgctgcacacttatgctatttactgatgaattcattgaaaaatattgat
gataaacagagggaatttcgtttacctggtaaaatctggttaattggtgtccctcctaat
cacattaccagtagcggtgatgttattaacaatacttccgatgaattccaggaggataat
attgcgtcaaatcatattttatctccattgttcgctacttcagaagctattcaactcact
gaaatatatgaatattctattcaattggctaaccgtaaatttcatctacgtcagttaatg
ccttttcgtcttgtttatgctatacgacttttggatgctggttttattgaaaaagcttat
cgttatttaacagctatcgggaatgagattcttactgaatttgatgaaggaatatatcaa
cttaaacatccattcgtctgtaacaatgatcataataataataatacatatgttgatcca
ttattgtatagcttaattaataattgtctacgattagctgaaccattacaatatcatcca
gaaattgaaagcttcgatctgttacaatcatcaacaaatagtcaattaatggatgattat
agttttggatttcaattcaaaaattcatcatattctatgcctgtacaaaataaaaataaa
aattggattgaacgattaaatcaaatctttaatcaaatgaatcaaaagatcgatcatcca
cgctataaaccatctgtaataaaatcaagagaaaatcccagtaaagatgttcgtttcact
aatgaagctaatgaagctacagaatattccgatcataatgattttaatcattatcatcaa
tcatcacaaccacttcaacagcagcaacaacaacaacaacaaccacttcaacagcaacaa
caacaacgtcagtatcatcaattcaacaaagaatcaaattataaaccatccgttgaatat
agatctaatattcaaacacttgattcttcttcattcttatcaacagataacagagatcaa
cgtaaattgtttagtcatgaaccattcaatcaacaatcaccatcctcattatcatcagca
ccatctcatgaatactcgtatcaatcagaaccctataatcaattatcttctcattcaaca
tctaatcttattcaacataatgataatatacaacataattattctatgaattcacctgtt
caattgtcaaactatccaatgtccttacaatcaaatcaatcaatcaattcagtaacagtt
tcgaaatcatcttcatcatcatcatcggtaacaactacattgaatgaaatgagtagttct
atttttatgcctatcaatcatcaaactgattcacaactaataataaataatgataataat
tcattgaattattctacattatctaatcagcaaccatttgattattttgcaaatattcaa
agtattcactctcgttctcgtacagtatccggtaattctgaaaataatactgttaacatg
acaaattctacgactgttgatcaattggatccttcatccaataatagaagtttattatct
acaaaatatgaaacatcatttacaaatgaacatcattttcaacaacaatcaaaacaatct
atatctaatttatcacaaatgaattatcttccacaaccatctagacatccatcttcaatg
atgaatgataatttaaaagattatcataatactttttctactcctactactgctactact
tctactactaatagtaatcataatagtagtaatgaacgttttacacaggataagtcaaat
gatttggataatttagataagaatgaacaacaatcaaaagatggttggttatcaggttgg
tttggacgtctcaagaaaaacggtccaaagaatattcatctaccggatgattctaagcct
tctatagtttgggatgatcgccttaaacaatggattgatgtgaatgatcctgacggaagt
gaatcgaacaaggtaccaccacctccgccagcaccagcatcttcatttattatgcaaaaa
aatgatgacagttcaatgagttaa
DBGET
integrated database retrieval system
