Schistosoma mansoni: Smp_123410.1
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Entry
Smp_123410.1 CDS
T01095
Name
(RefSeq) DEAD box ATP-dependent RNA helicase, putative
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smm03009
]
Smp_123410.1
Enzymes [BR:
smm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Smp_123410.1
Ribosome biogenesis [BR:
smm03009
]
Eukaryotic type
90S particles
Helicases
Smp_123410.1
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SWI2_SNF2
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
8342421
NCBI-ProteinID:
XP_018645302
UniProt:
G4LVK3
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Position
2
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AA seq
453 aa
AA seq
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MTFEELGVCPEIVELLRDKGINKPTEVQEGCIPVILEGNDVVACAKTGSGKTAAFLIPIL
QSLMTELKPLYALIITPTRELAHQIGEQAAGLNLIQGEPLCNVLVITGGRSIVHQSIDLA
RSPHIVVSTPGRLADLLRTQTAAQEADTENKPEWTLSRTKVVVLDEADRLLEDNFGEDLN
TILKALPKRRQTLLFSATFSGAVKSSLEAAKSVAYAENRRPPILWQPECMTTCSSAGAVT
VETLSQYYILMRPEHKEAFLVHTVDQFLTENPHSLIMIFTNKCKWCHLIGLMMTSLGIKT
TLLHSSMTQKNRISSLTLFRSSQIRVLIATDLASRGLDFPTVDIVINHNVPIRPKDYVHR
VGRTARAGKAGLALTLCDLFEVKRLKAIQTFINKELKTFDVNEKKVAQIIAEVSIARRDA
ERKLDEIRFDEKREINKAKNLMKARSSKTLNKT
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgaagaacttggtgtatgtcctgaaattgttgagttgctaagagataaaggg
attaataaacctacggaagttcaagaaggctgcattccagtgattttggaaggaaatgat
gtagtagcatgtgccaaaactggttctggaaaaacagcagcatttttgatccccatactt
caatcactcatgacggaactcaaaccattatatgctctaataattactccaacaagggag
ttggcgcatcaaattggggaacaagccgctgggttaaatttaatccaaggtgaaccacta
tgtaacgtgttggtgataactggtggaagaagcatagttcatcagagtattgacttagct
cgatctccacatattgtcgtttctactcctggacggttggctgatcttctgcgcacccag
acagccgcacaagaagctgatactgagaataagccagaatggaccttatccagaacgaaa
gtggtggttctagacgaagcagatagattgttggaagataattttggcgaagatctgaac
actatattaaaagcacttccgaaacgtcgtcaaacgttgctttttagtgctacattcagt
ggtgcagtcaaatcttccttagaggctgcaaagtcagtggcctacgctgaaaacagacgc
cctcctattttatggcaacctgaatgcatgactacgtgttcatctgcaggggccgtaact
gtcgagaccttaagtcagtattatattctgatgcgacctgaacacaaagaagcatttttg
gttcatactgtcgatcaatttcttactgagaatccacattcacttattatgatttttaca
aataaatgcaaatggtgtcatcttattggactgatgatgaccagtctaggtattaaaaca
accttacttcactcctctatgactcagaaaaaccgcatatcttcattgactctttttcgt
tctagtcagattcgtgttctgattgcaacagacctggcaagccgtggacttgattttcca
acagttgatatcgtaatcaatcataatgttcctattcgacctaaagattatgttcaccga
gtaggccggactgctcgggctgggaaagctggtttagcattgacattgtgtgaccttttt
gaagtaaaacgtttaaaagctatccaaacatttatcaataaggaattgaagacatttgat
gtgaacgagaaaaaagtagctcaaataattgccgaagtatctatcgctcgtcgtgatgca
gaacgcaaactagatgaaattagattcgatgagaagcgtgaaatcaataaggcaaaaaat
ctgatgaaggccagatcgtcgaaaactttaaataaaacttag
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