Schistosoma mansoni: Smp_123500
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Entry
Smp_123500 CDS
T01095
Name
(RefSeq) putative atp-dependent RNA helicase
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smm03009
]
Smp_123500
Enzymes [BR:
smm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Smp_123500
Ribosome biogenesis [BR:
smm03009
]
Eukaryotic type
90S particles
Helicases
Smp_123500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
AAA_22
DHX37_C
ResIII
ATPase
nSTAND3
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
8342440
NCBI-ProteinID:
XP_018651171
LinkDB
All DBs
Position
3:<15154566..>15178102
Genome browser
AA seq
1183 aa
AA seq
DB search
MANVKRTCADLIDFEFNEAKYDSSNPLVLPGKNESRSKGKRQLDSNQIVQHQILSKKRRK
ELLRKVSQKEKKLSRSELWRELEEYKKSETTQHISVLPLFNKPKKSEKKLTNCNIRGKSW
KQQCNDLSDISKSTDEYSSDESVSIDEAPFTPAAPEQDPTNDKVGEVTQTIVGHKHENKP
LEAEKVSKPARFVLVSRTPEVVAARLALPILSDEATIMESISENDCVIICGATGCGKTTQ
IPQFLYEAGYAIEGYMIGITEPRRVAAISMAHRVGEELNLTSGQVSYHIRYDKEVTKETL
IKFMTDGILLQEIKQDFELSKYSVIIVDEAHERSIYSDVILGLISMVVRLRRQRFTDNIP
TNGKVLSPLKLIIMSATLKVDDFAENRRLFPHKPPPVIHIESRQYPVPNWLARAFPKMDD
QKVNVTNERCNKTHKHQKEKKKLEESVKAPASSNSLNSTVLEEKDQFNSGIDLNNFDIIP
VDEETEIGHTRINSKEVVSTKEKQSNKVTYETVDDSDIEEIGEDDDILGQINEIRNESYP
GPVYALPFYSLLSPERQQSVFQPPPENHRLIVVATNVAETSITIPNIRFVVDTGKVKTKV
YEPATGTSNFEIIWISQASAEQRAGRAGRIGPGHCYRLYSSQIFSSMKQFSIPDILSRPI
DEVVLMLKLYLGNTKLTLFPLPTPPLPQAIEAAERRLIALGALKEITNASGGVSRTITDA
GKWMTRVPVPARFARMLLFANQCQLMPYAVILVAALSVPNLFLSQDTPLSEQEKSFQSNF
VQQFVRKKEDLYLGDLAVLLGTICCLERYSAQLSGLTPAEPGIIESVGGKAYVSRDPEGA
LRQLVHRCGVRWNAYKEVRQLRKQLTDILNVIIPDLGLSIDLCLPKPSDFQLIQLRQLFL
VGSPCQIAKKLSVSVTGLPGNERRRLRYAYEIPGKQGPVFIDSNSPLARENFPFVAYLEL
HTTSKPFLRSVCAIDPGWIPFLAPHSYAVNELVLTDNVDTSEKKSENQSIANESNNRGSD
DDEGSKSAPNTSVTSNSLVSLPTPRYDSERDIIVTGAKSITYIGLGVVPDSSTPLFDNQF
LDLPSTVLVPINSVAAAQSLGFKESLTWSVRWFTRYLLEGVIFSEFKKWFPLKMKKCISP
QIVTVSWGIIRPEVRSIVSLLVADKIDSKRKLLQQWESDVQCK
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgttaagcgcacttgtgccgacttgattgatttcgagtttaacgaagcaaaa
tacgactcgagtaatcctttggttttacctgggaaaaatgaatctcgatctaaaggaaaa
cgtcaattggacagtaatcaaatcgtgcaacaccaaattttatcaaagaaacgacgaaaa
gaactgttacgaaaagtatctcaaaaggagaagaaattatcgcgttcagagctgtggagg
gaattagaagagtataaaaaatctgaaaccacccaacacatttctgtcttacctctgttc
aacaaacctaaaaagtcagaaaaaaagctaaccaattgcaacattaggggaaagtcttgg
aaacaacagtgtaatgacctatcggatatttccaaatctacagacgaatatagcagtgat
gagtctgtttcgatagacgaggctccttttacgccagcggccccagaacaggatcctact
aacgacaaagtcggagaagtcacacaaaccattgttggacacaagcatgaaaacaaacct
cttgaggcagaaaaagtttccaaacctgcccggtttgttcttgtttcaagaacacctgag
gtagtagcagctcgtctcgctttgcctattttgtctgatgaggcaactataatggaaagt
atcagtgaaaacgattgcgtcataatatgtggagctacaggctgtggtaaaactacacaa
atcccacagtttctatatgaagcgggatatgctatagaggggtatatgattggaataacg
gaaccccgtcgtgttgctgccatatctatggcacatcgagttggtgaggaattaaattta
acgtctggccaggtttcttaccatatacgatatgataaagaagtaaccaaagaaacgctg
ataaaatttatgacagacggaatattgttacaagaaataaaacaggactttgaattatca
aaatattctgtcataattgtggatgaggctcatgaacgttcaatttactccgatgttatt
cttggtcttatatcaatggtagtacgattacgtcgtcaaaggtttaccgataacatacca
acaaatggtaaagtactatcgccactgaaattgattatcatgtctgcaactttaaaagta
gacgattttgcggaaaatcgtcgtttatttccgcacaaaccacccccagtaattcatatc
gaatcacgtcagtatcctgtaccaaattggcttgcaagggcttttccaaagatggatgat
caaaaagtaaatgtaacaaatgaaagatgtaataaaactcataaacaccaaaaggaaaag
aagaaattagaagagtctgtcaaagcacctgcttcctcaaattcattaaatagtaccgtt
ttggaagaaaaagatcagtttaactcaggcatagatctgaacaactttgatatcattcct
gttgatgaagaaacggaaattggtcatactcgaattaattctaaagaagttgtttcaacg
aaagaaaaacagtcgaataaagttacttatgagacggtggatgatagtgatattgaagag
attggtgaagatgatgatatactcgggcaaattaatgaaattcgtaatgaatcttatcca
ggaccagtttacgccttaccattttattcattattatcaccggaacgccaacaaagtgta
tttcagccaccacctgaaaatcatcgtctcattgttgttgctaccaatgtcgcagagact
tcaatcacaatcccgaacattcgatttgttgtagatactggcaaagtgaaaaccaaagtt
tatgaaccagctactgggacttctaattttgaaattatctggattagtcaagcatccgct
gaacaacgtgcaggaagagctggtcgtattggtccggggcattgttatcgtctttatagt
tcacaaattttctcaagcatgaaacaattctctattcctgacatactttcacgtccaatt
gatgaagtggttttaatgttaaagctatacctgggtaatacgaaactgacattgtttcct
ttaccaactcctcctttgccacaagcgattgaagcagctgaacgccgactaatcgctctc
ggtgccttaaaagagattactaatgcttctggaggcgtatctcgtacaattacggacgcc
ggtaaatggatgacacgtgttccggtccctgcacgctttgcacgaatgttattatttgca
aatcagtgtcaattaatgccatatgctgtgatactagttgctgccttatctgtaccaaat
ctcttcctctctcaagatacacctctctcagaacaagagaaatcttttcagtcaaatttt
gtccaacagtttgtcagaaaaaaagaagatttatatctgggagaccttgcagtactactg
gggactatatgctgtttagaacgctactcagctcagctcagtggactgacccctgcagaa
cctggtataattgaatctgttggtgggaaagcctatgtgtcacgtgatccagaaggtgca
ttgagacagctcgttcatcgatgtggtgttcggtggaatgcatataaagaggttaggcag
cttcgtaaacaactaaccgatattttgaatgtgattattccggatcttggtctttcgatt
gatctatgcttacctaaacccagtgattttcaattaatacagctgagacaattgtttctt
gttggatcaccttgtcaaattgctaaaaaacttagtgtctctgtcactggtttgccaggt
aatgaacgtcgtagactacgttatgcctatgaaattcctggcaaacaaggacccgtattt
attgattcgaattcccctctggcacgtgaaaatttccctttcgtagcttatttggagcta
cataccacttcaaaaccatttttacgttctgtttgcgcaatcgatcctggatggattcca
ttcttggcgcctcatagttatgctgtcaatgaacttgtattgacagataatgtcgacacc
agtgaaaagaagtctgaaaatcagagtatagctaacgaatcaaataataggggaagtgac
gatgatgaaggctctaaatctgctcccaatacatccgttacatcaaactctcttgtatcc
cttcccactccgcgttatgattctgaacgtgatattattgttacaggtgcgaaatctatt
acgtatatcgggttgggtgttgtacctgattctagtacaccactgtttgataatcagttt
ttggatctgccaagtacggttcttgttcctataaatagtgttgctgcggctcaatcatta
ggcttcaaggaatcattaacatggagtgtccgatggtttactcgttatcttttggaaggt
gtaatattctcggaattcaaaaagtggtttcctttaaaaatgaagaaatgtatttcacca
caaattgtaactgtttcatgggggatcattcgccctgaagtacgttctatagtatctctc
cttgtcgctgacaagatcgattcaaagaggaaactgttacagcaatgggagtctgatgtc
caatgtaagtga
DBGET
integrated database retrieval system
