Schistosoma mansoni: Smp_123730
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Entry
Smp_123730 CDS
T01095
Name
(RefSeq) putative beta chain spectrin
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
smm
Schistosoma mansoni
Pathway
smm04517
IgSF CAM signaling
smm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
Smp_123730
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
Smp_123730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smm04812
]
Smp_123730
Cytoskeleton proteins [BR:
smm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
Smp_123730
Intermediate filaments
Intermediate filament-binding proteins
Smp_123730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
PH_9
PH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
8348318
NCBI-ProteinID:
XP_018652093
LinkDB
All DBs
Position
4:17192000..17241975
Genome browser
AA seq
1250 aa
AA seq
DB search
MDIKKKILVELHDHAKILSNLDNENQNSEVESKMYSLIKKFWKIQIFIYQHAEELKAQKH
IYQLYRDLENERIWTHEKLLLANNTYIGRSLFAVNQLIRQHQLLIKEVNNRTNRIEITIQ
VKLRYDLNELKNQIIKRTDQLNIGLQCFIHLDEFIELRNWLQECEDLLLLESRASRDIIT
TKIELKKHANIEYRVNILLANCICEFNQKSLKLINEFLERKEKHKNQLELIKTNENLEKV
VQQLSGISTQKQTDQSQRLQSIVHADENMNKSKQNSFDNLINRRKLRSQIKQIRKRIQMI
QSIQRIMDRQYSSLLDVCVQKRQRLEEILSLSIVYEEVSELKSWLNQQILIASSIYTGRS
LNECVRLINRFVHFGENLLGESFTSFVEIELRSFDPISTIYPMNITDQFVYTSGFAIERI
EKVMNMCRCLIRTKHSDSPRIAYWQDIITETWADLHELIYSRVRLLISAAHRFIFLTRCS
ETLKLVQEKSDQLSQSIGKDVQAICKQLSLLCAFEQDVQALEPLINWVEKAADYLLPLYS
GNWIKRLKKPHDILLSVWYQLKDNTHLRRIRLNHAIALYRWISNLDILFNWIQQCQKELE
RIEMDIWNINPQSTIIKKSNNITTENIKFAIGQTLQLRAELNARDDKVKSCLEEGKRLKA
SFKQHLMQYDKSKYEKCHQPYEMSQLYLKTEMERQHVTNNSADEIEICKISEQRKNSPKN
TLQNLNVTEQHTRTGVIRSISSDPYLESVSANYSQKSGSSSSALNQLNLQNDSQMNDEEN
QIITDLQLRMKRLVTSWYNLHMKWHQINERLELQLSINEFESVADSLEHWLILHSPEVEC
LDMGDSIKETQILIDRLNVLERNTLPQINRYEKVKQLTKFELAEIKENMLNVPISCVNIV
HNQDTENIQTLLKYYELNEKDVSNDLDDCKKDVDTSQENLKDTTDSTEVSRQVEESSQHS
FDSISDYLMRKHEWINHNCKSRDRSWYELYMVLNTSVKQLLAYKNKSDYDEDNPLSNTFR
GEIGLLVGQNLITANETKDYTKRANTFRITSTATGARYLFQAQTSEIMRKWLNLIQNINR
QTRSTLGPTIITLSRPSEEFQNPLVIIDMQETFSTSKKLTLTQILKSKTTNQISCIRRHS
STQENDFTNNLLENIESPQCRMKRFPSVRTMRVFSPRQMVRWLTFKYSSFSPNSSSTSHQ
TPKLIRSNTSHNMKSEQSNQSTPLLRKSLTYSSLHKISRFSMTSKSLKDT
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggatataaagaaaaagattctagttgaactacatgatcatgcgaagattctatcaaat
ttggataatgaaaatcagaattctgaagtcgaatcaaaaatgtatagtttaattaagaaa
ttttggaaaattcaaatatttatttatcaacatgctgaagaattgaaagcacaaaaacat
atctatcaactttatagagatttagaaaatgagagaatttggactcatgaaaaacttctt
ttagctaataacacttatattggtcgttccttattcgctgtaaatcagttgatcagacaa
catcaattacttataaaagaagtgaacaatagaacaaatagaatagaaatcactatacaa
gtgaaattacgttatgatttaaatgaattaaaaaatcaaataataaaacgtacagatcaa
ttaaatataggattacaatgttttatacatcttgatgaatttattgaattacgtaattgg
ttacaagaatgtgaagatttattattattagaatcaagagctagtcgtgatataattaca
accaaaattgaattaaaaaaacatgcaaatattgaatatcgtgtaaatatattattagct
aattgtatttgtgaatttaatcaaaaatcattgaaattaataaatgaatttttggaacgt
aaagaaaaacataaaaatcaattggaattaattaaaacaaatgaaaacttagaaaaagtt
gttcaacaattatctggaatatcaactcagaaacaaactgatcaaagtcaacgactgcag
tctattgtgcatgctgatgaaaatatgaataaatcaaaacaaaattcatttgacaattta
ataaatcgtcgtaaattacgtagtcaaattaaacaaatacgtaaacgtattcaaatgata
caatctattcaacgaattatggatcgtcaatattcaagtctattagatgtttgtgtacag
aaacgtcaacgtctagaagaaattctatctttaagcattgtatatgaagaagtttccgag
ttgaaaagttggttaaatcaacaaatccttatagcttcatcaatatataccggtcgaagt
ttaaatgaatgtgtacgtcttattaatcgatttgtacattttggtgaaaatcttctaggt
gaatcttttacatcatttgtagaaattgaactacgttcatttgatcctatatcaacaata
tatccgatgaatataactgatcaatttgtatatacatctggttttgctattgaacgtatt
gaaaaagttatgaatatgtgtcgttgtttaatacgtacaaaacattcagattctccacgt
attgcatattggcaagatattattacagaaacatgggctgatttacatgaattaatttat
tcaagagttagattattaatatcagctgctcatcgatttatttttttaactcgttgctct
gaaactttgaaacttgttcaagaaaaatctgatcaattatctcaatcaattggtaaagat
gtacaagctatatgtaaacaattgtcgttattatgtgcatttgaacaagatgttcaagct
cttgaaccattaattaattgggtagaaaaagcagctgattatcttcttcctctttattct
ggtaattggattaaacgtttaaaaaaaccacatgatattctactttctgtttggtatcaa
cttaaagataatacacatcttcgtcgtataagattaaatcacgctattgcattatatcgt
tggatatctaatttagatatactatttaattggattcaacaatgtcaaaaagaattagaa
cgtattgaaatggatatatggaatattaatccacaatctactattatcaaaaaatcgaat
aacatcacaactgaaaatataaaatttgccattggtcaaacacttcaattgcgagctgaa
ctaaatgctagagatgataaagtcaaatcatgcttagaagaaggtaaaagattgaaagct
tcattcaaacaacatttgatgcaatatgataagtcaaaatatgaaaagtgccatcaacca
tatgaaatgtctcagttatatttgaaaacagaaatggaaagacaacatgtaaccaataat
tcagctgatgaaatagaaatttgcaagatcagtgaacagcgaaaaaattccccaaaaaat
actttgcaaaatttgaatgttactgaacaacatactcgaactggagtaattagatcaatt
tcctctgatccttaccttgaatctgtaagtgcaaattatagtcagaagtcaggttcatca
tcttcagcattaaatcaactgaatttacaaaatgatagtcaaatgaatgatgaagaaaat
caaataataacagatcttcaattacgtatgaaacgattagtaacatcatggtataattta
catatgaaatggcatcaaattaatgaacgattagaattacaacttagtattaatgaattt
gaaagtgtcgcagattctttggaacattggttgatacttcattcaccagaagtagaatgt
ttagatatgggtgattctatcaaagaaacacaaatattaattgatcgattaaatgttctg
gaacggaatactttgccacaaatcaatagatatgaaaaagttaaacaacttacgaagttc
gaactcgctgagatcaaagaaaatatgcttaatgtgccgataagctgtgtaaatattgtt
cacaatcaagatacagaaaatatacaaacattattaaagtattatgaattgaatgaaaaa
gatgtatcaaatgatttggatgattgtaagaaggatgtcgacacgtcacaagagaattta
aaggatactactgattcaactgaagttagtcgacaggtggaagaaagttcacaacattca
ttcgattctataagtgattatttaatgagaaaacatgaatggattaatcataattgtaaa
tcacgagatcgttcatggtatgaattatatatggtcttaaatacatcagtgaaacaactg
ttagcctataaaaataaatctgattacgatgaagataatcctctatccaatacatttcgt
ggagagattggattactggttggacagaatctaataactgccaatgaaacaaaggattat
acaaaacgagcaaacacgtttcgtattacatcaactgctaccggagctcgatatctattt
caagctcaaaccagtgaaattatgagaaagtggcttaatctaatacaaaatatcaaccga
caaacaagatcaacattaggtccaactattatcactttatctagaccatctgaagaattc
cagaatcctttagtcattatagatatgcaagaaacattcagtacatcgaaaaaattaact
ttaacacaaattctcaaatcaaaaacaactaatcaaatatcatgtatacgaagacatagt
tcaactcaggagaatgattttacaaataatctattagagaatatagaatcaccacaatgt
cgaatgaaacgatttccttcagtacgtacaatgagagtattttcaccaagacaaatggta
cgttggttaacatttaaatattcatcgttttcacctaactcatctagtacaagtcatcaa
acgcctaaattgattagaagtaatacatcacataatatgaaatctgaacaatctaatcaa
tcaactccattactacgtaaaagtttaacttatagttcattacataaaattagtcgattt
tccatgacatcaaaaagtttgaaagatacatga
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