Schistosoma mansoni: Smp_125890
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Entry
Smp_125890 CDS
T01095
Name
(RefSeq) putative DNA photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smm03400
]
Smp_125890
Enzymes [BR:
smm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Smp_125890
DNA repair and recombination proteins [BR:
smm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Smp_125890
Prokaryotic type
Smp_125890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
8346901
NCBI-ProteinID:
XP_018648974
LinkDB
All DBs
Position
1:45333866..45349879
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AA seq
490 aa
AA seq
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MAVLAETVHEWLDGIHNKRLSTASSAENFKFHKSRIRHLSGPGTFPEKDDGFGQGGVLYW
MSRDQRVQGNAIQGYTFFVFLVLLISKEIIFIAQPEDISSGCKHRWSDENALFNQTDRIE
KNFLYETYVAKSVVDLAKLLNVGCLVTDFCPLRAPRSWVKKVTDELPDNIPFCEVDAHNI
VPVWCGSEKREYSARTIRSKLFQQSPKFLTDFPPIIKHTCSDKITVLPPPVNWESILSDY
VGDKSVKPVDWAVPGTQAGLEVLYEFISKRLKKFDPHRNDPAHPALSGLSPWLHFGQIAP
QRAVLEVVAVQKHFGRSADIFIEECFNRRELAENFCFHTPFYDSIKGAYDWARESLMTHS
TDKRDPAYSKTQMETAQTGDDLWNAAQRQLVLKGKMHWFLRQYWAKKILEWCAEGPESAI
QIAIYLNDRYSLDGTDPNGYVGIMWAICGVHDQGWPERPIFGKIRYMNYKGCLRKFSVST
FVSRYPEKLD
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggctgtactggctgaaacagtacatgagtggcttgatggtatacataataaacgtctt
tctactgccagttctgctgaaaatttcaaatttcacaaatcaagaataaggcatttgtct
ggtccaggcactttcccggaaaaagatgatggattcggacagggcggagtactttactgg
atgtcgcgtgatcaacgagttcagggtaatgcaatacaaggttatacatttttcgtattt
ttagtgcttttaattagtaaggaaataatttttattgctcagcctgaagatatatcttct
ggatgcaagcacagatggtccgatgaaaatgctctatttaatcaaactgatcgaatagaa
aaaaattttctttatgaaacgtatgttgcaaaatcagttgttgatttggcaaagctattg
aatgttggatgtttggtcacagacttttgtcctttaagagcgcctcgttcttgggtaaaa
aaagttactgacgaactacctgataatatccctttctgtgaagttgatgctcataatata
gttccagtttggtgtggatcagaaaaacgtgagtattctgctcgaactatcaggtcaaaa
ctatttcaacaatctccgaagtttctaacagattttccacctattattaaacatacttgt
tcggataaaattactgtccttcctccgcctgttaattgggagtcaattttatctgattat
gttggtgacaaaagtgtgaaacctgttgactgggctgtacctggaactcaagctggttta
gaagttctgtatgaatttatcagcaaacgtttaaaaaaattcgaccctcatagaaatgat
cctgctcatccagctcttagtggattgtcaccttggttacattttggtcaaatcgctcct
cagcgtgctgtgcttgaagtagttgctgttcaaaagcactttggacgatcagccgatatc
ttcattgaagaatgctttaacagaagagagttggctgaaaatttttgtttccacacacct
ttctatgattcgattaaaggcgcatatgactgggcacgtgaatcacttatgacacactca
acagataagcgagatccagcgtacagtaaaactcagatggaaactgcccaaactggtgac
gatttatggaatgcagcccaacgtcaattagtgctcaagggaaagatgcattggtttctg
cgccagtattgggccaaaaagatacttgagtggtgcgcagagggtccagaatcagctatt
caaatagcaatatacttaaacgatcgttacagtttagatgggacagaccccaatggatac
gttggtattatgtgggcaatatgtggtgttcatgatcaaggctggcctgaacgacctatt
ttcggtaaaatacgatatatgaactataaaggatgtttacggaaattttctgtttctaca
tttgtatcacgataccctgagaaattagattaa
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