Schistosoma mansoni: Smp_126310
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Entry
Smp_126310 CDS
T01095
Name
(RefSeq) putative syntrophin
KO
K24064
beta-syntrophin
Organism
smm
Schistosoma mansoni
Pathway
smm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
Smp_126310
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GFIT
Motif
Pfam:
PDZ
PH_17
PH
PDZ_6
PDZ_2
Tricorn_PDZ
DUF6288
Motif
Other DBs
NCBI-GeneID:
8342631
NCBI-ProteinID:
XP_018653963
UniProt:
G4VPX9
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Position
W:complement(8278672..8307859)
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AA seq
554 aa
AA seq
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MSTQDSLVISGQLEIYLRNTWIPIKATLQHDALVIELEHTPSVSSNHHEDISTAKRLVRI
TKEELNGLGISIKGGRENKTPILISKIFKGMAAEQTGQLNVGDAILSVNGEDLRNSTHDE
AVRALKRAGRIVELEVKHMHEVTPYFRRAVGMETIACSADLSWPTSQLGNLVPFGANDST
GKNVTSTSGIEHPGRSGGPGVVPLRLTHLVRDLTLPDVTGCCFELHSSDGRRSCLLRAPD
AQEARMWFDAIHSKMKIINKSYLAELNRLLPPTQELKQLDWLVELRCTSSDVPNRVGDHM
DDINGNIVSDILSAGDHTTATAHSQLIHTTWKPVFAALSDRDLLLYDTAPTSKEEWANPV
QAHPLIATRVVHVDLRKSILNDSHAQNEIGRRYPPGDMVTFVTRTGSKHGVESHTFAVST
QEDLMTWSNAIIEGAHMAVAGAQEVVITCRWQNYDCRLTLHYDTGLKLISCQFPIESHST
PQSYPHGNMTSGHVIWEYPYERLRSTADDGRTILWIDFGPDGEYELDLLGCPKPVVFILH
NILSAKVTRRGLFG
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtctacacaagatagtctggtcataagtggacagttagaaatatatctccgtaataca
tggataccaatcaaagcaactttgcaacatgatgctttggttattgaattggaacacact
ccaagtgtttctagcaatcatcacgaagatatttccactgcaaaacgtctggtacgtata
acaaaagaagaactaaatggcctaggaatcagtattaaaggtggtagagaaaataagaca
ccaatcctaatcagtaaaatatttaagggtatggcagctgaacaaactggtcaattgaat
gttggtgatgcaatattatctgtgaatggtgaagacctacggaatagtacacatgatgaa
gcagttcgagcgttgaaacgtgctggacggattgttgaattagaagtgaagcatatgcat
gaagtgacaccgtattttcgaagggcagtagggatggaaactatagcatgctctgctgat
ctcagttggcctactagtcagcttggtaatctggtcccattcggagctaatgatagcact
ggtaaaaatgtcacatcaacaagcggtatagagcatccaggacgttctggtggtcctggt
gtagtgccattaagattgacacatttagtaagagatttaacattaccagatgtgactggt
tgttgttttgagttacacagttcagatggtcgacgttcatgtctactccgtgcaccagat
gctcaagaagctcgaatgtggtttgatgcaatccacagtaaaatgaaaattataaataaa
tcttatttggctgaactaaatcgtctacttcccccaacccaagaacttaaacaactggac
tggttagtggaattacggtgtactagttcagatgtaccgaatagagtaggtgatcatatg
gatgatataaatggaaatattgtaagtgatattctatcagctggagatcacacgacagcc
acagcacattctcaacttattcatacgacatggaaaccagtattcgcagccttatctgat
agagatttgctattgtatgacactgctcccacatctaaagaagaatgggctaatcctgta
caagcacatccattaattgctacacgtgttgttcatgtagatttaagaaaatcgattctg
aatgattctcatgcacaaaatgaaattggtcgaagatatccacctggagacatggtcaca
tttgtaactagaacaggtagtaaacacggtgttgaatctcatacatttgccgtatctact
caagaggatttaatgacgtggtctaatgcaattattgaaggcgcacatatggctgtagcc
ggggctcaagaagtagttatcacttgcagatggcaaaattatgattgtcgtttaacatta
cactatgatactgggttaaaattaatctcttgtcagtttcctatagaatcacattcaaca
ccacaatcttatccacatgggaatatgactagtggacatgtgatatgggagtatccatat
gaaagattgaggtcaactgcagatgatgggaggacaattctgtggattgatttcggacca
gatggagaatatgaattagatttactaggatgtccaaagcctgtagtattcattctccac
aatatattatctgccaaagtaacgagacgtggattatttggataa
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