KEGG   Schistosoma mansoni: Smp_126370
Entry
Smp_126370        CDS       T01095                                 
Name
(RefSeq) putative dna-directed RNA polymerase II
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
smm  Schistosoma mansoni
Pathway
smm03020  RNA polymerase
smm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:smm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Smp_126370
  09124 Replication and repair
   03420 Nucleotide excision repair
    Smp_126370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smm03021]
    Smp_126370
   03400 DNA repair and recombination proteins [BR:smm03400]
    Smp_126370
Transcription machinery [BR:smm03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     Smp_126370
  RNA polymerase III system
   RNA polymerase III
     Smp_126370
  RNA polymerase I system
   RNA polymerase I
     Smp_126370
DNA repair and recombination proteins [BR:smm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Smp_126370
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 8342640
NCBI-ProteinID: XP_018653952
UniProt: G4VPW8
LinkDB
Position
W:complement(8006410..8007170)
AA seq 205 aa
MDDSETYKLWRIRKTILKMCKDRGYLVMPKELEQSLEDFKATVGDPPTRKDLLMVVNHEE
DPADMLYVFFPEEEKVNMKTVRAYLNQMQQDSTYRAILVLQEKGLTPSAKTAIAELSCKY
TLECFFENELMVNITEHQLVPQHNVLTQEEKKELLERYRLKENQLPKMQASDPVARYYGL
RRGQVVRITRPSETAGRYITYRIVL
NT seq 618 nt   +upstreamnt  +downstreamnt
atggatgactcagaaacctacaaattgtggcggattcgtaaaaccattctcaagatgtgc
aaagacagaggttatctagtaatgcctaaagaattagagcaatcactcgaagatttcaaa
gcaacagtcggagatccaccaaccagaaaagatcttctcatggttgttaaccatgaagaa
gatcctgctgacatgttatatgtattctttccagaggaagaaaaagttaacatgaaaact
gtgcgggcatatttaaatcaaatgcaacaagacagtacttacagagcaattttggtcctt
caagaaaagggcctcacaccttctgcgaaaacagctattgcggaactttcgtgtaaatac
actttggagtgtttcttcgaaaatgagctaatggtcaatataacggaacatcagttggtt
ccgcagcacaacgttctcacacaggaagaaaagaaagaattactcgaacgatataggtta
aaggaaaatcaacttcctaaaatgcaagctagcgatcctgttgctcgatattatggtcta
agaagaggtcaagttgtacgaattactcggccatcagaaacagccggacgatatatcact
tataggatagttttgtga

DBGET integrated database retrieval system