KEGG   Schistosoma mansoni: Smp_127180
Entry
Smp_127180        CDS       T01095                                 
Name
(RefSeq) hypothetical protein
  KO
K13154  U11/U12 small nuclear ribonucleoprotein 31 kDa protein
Organism
smm  Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:smm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:smm03041]
    Smp_127180
Spliceosome [BR:smm03041]
 Other splicing related proteins
  Minor spliceosome components
   Minor spliceosome specific factors
    Smp_127180
SSDB
Motif
Pfam: Nop25 PHD Bromo_TP PHD_5 PHD_2 Bromo_TP_like PHD-1st_NSD
Other DBs
NCBI-GeneID: 8352486
NCBI-ProteinID: XP_018649231
LinkDB
Position
1:53910543..53947233
AA seq 1690 aa
MSSDFRSAMIQVIAQLCGQVGFEQITEASLELLISVVEAYFLSLVRNVYTITASDGYAQV
ADGLLALRLMGQTPQGFAKFVIENSQFFTRAPTMTCGPVYGKSCLNIPPEDHPELEERPP
FIPRHLPLNYREDFGSQTSQAEPSIKEFTFNTCLSPSSPNTVSTSSNCLTGATSTSVTTV
ARTLPEWASRSTYRMTCVSVDPLTKCLVEHCPPWKASDVLSESPIPDNYVGSTNSYFSSI
SKRELAYDSTPEDNKNPYKSPSSPAKQCGASDAQWAAALQATPSTQQPKRIVYTPSRFDP
SSTPSWTHIRRAANSSRTPLFVKQPIGTDSRYKRQASSLAYSAAPKIPRLSTGRRANRCS
KFGRGRPSKLSRQRISKSSRSNSPITEQHSDNTNSMEKTLNPTSGHSDFKEDIINTELSP
LDSDISTLSNTINSPKSLEETSVTLPEKATDDSSMAPKVDPGDEKQTVWNGKDYPDHDSP
CTPPLRNPVNSDCLITSTDVLSSSLVTSPKRLENRMKSVDIELSDLKVLNISEKGTSSGT
QNSVRLKPHQFRRKARGRRRDKCRVSAFNSLFQNPLRKCSDPLSIKSQNRSFQTVQSLER
IPKVENNVNDHQTVSVVSDNPLKSSRPTRSVHKTGRRTGLNADAPHDSLKNEPTITQSSS
DIKMETICSPASDTTEPMTFSEKAELLRILSIDTSYVKHTSSTTLNVVSNNHFLKSENSV
FNKESFGKLQQHASITLRSLPSSPSSLDSSLSSSSSTSKYSPEEPLLLKSEMNDVKGCDN
YGGDISQGVNKSLFSSSCIQKTVNANLSPVDFSDSKKTSPATSCNNKIHTTHNASPPVDA
LGVGPPPLLPLSSKSADQKRCSSSLFSTSTESDHIVALPPTLMSSRQSELVSTSSSCFFT
NSQPLSSKQISDKNGGLRITIKLGGGTLNEEHLASSLSPSSSSLSSSESTSGDEDNSTTH
YIQSQSSTQIFKREPNENSVLNPVDKDRPSSHSASLSQSTTFTEKTPKLVIRLGNGPTAA
SQSQTIAPTHIQSVSQNLTNYSENPTSVIDKKHSSSLITPPPPLQLTISRDRLKYRGRTA
SQGSDSNASNSSSTITGSLSSSEEEVVVHPHISPTGTGSLPPPPSLERLPPRPGHDGFLT
NKPTTQRHSIHHSQLPPPSLTSSINKSHSISPLKQMVSPGTVISNGPNPTATHCHLPPLL
PLFSSISEQIESVSQSSKSIPVSTEQSLHSDNSKSTSRLGDRRKRRLTDQDSRLPLAKRK
TLIQSSAVHSPKTESIVKRPRATVDSVFTDDESDAKNEEKSLLSLTASCSNDSVNNQKSF
RPSNSQNMYISNPPANSLAPSLNSTLSPLKTQPRTKHTGLYNKKSLYRPATKSSSHTSST
KSSVSLKSGKVRGRSKLIPASPTKTPSSINISSKIVQRESASQIVVESAGSSYYFNNDGE
QIWLCPICLLEDDGNLMIGCDNCQDWYHSTCLGLSKAPEVPQWFCPKCSQKPLPPNTLIK
LASKDSVPHLTKGSSRGSVTTHPNVTHSKRESGEYLTGFRKRKLERKERGRKAAEKQLKD
EIKAVKDKYREAARQKLENIQLPGSLDCVENILSSDKQVIGDHSVVIQELDLCNSHYFMG
ACKERNSDPIISAEEPHMSLKKALKMNPMRSKKRFRRSKKQTSKYKRRKYLSDILVINVR
KTHWVSVNNR
NT seq 5073 nt   +upstreamnt  +downstreamnt
atgtcaagtgacttcagaagtgcgatgattcaggtaatcgctcagctctgtggtcaagtt
ggcttcgaacaaatcacggaagcctcacttgaattgttaattagcgttgtggaagcgtat
ttcctctcattagtaaggaatgtatatactattacggcctcagacggttatgcgcaggtt
gcagatggacttctagctttgcgtttgatgggtcaaacgccgcaaggctttgccaagttt
gtcatagagaacagtcagttttttactcgagcgcctactatgacatgtgggccggtttac
ggaaagtcatgtttaaatatcccacctgaagatcatcctgaattagaagagcggccaccc
ttcatccctcgccatttgcctctaaattatcgcgaggactttgggagtcaaacatctcag
gcagaaccaagcatcaaagaatttactttcaatacttgtttatctccttcctcacccaac
acggtatctactagttccaattgtcttactggtgcaaccagtacttctgtaacaactgtt
gctcgtacacttcctgaatgggccagcagatctacatatcgtatgacatgtgtttcagtt
gatcctctaactaagtgcttggtggagcattgtcctccatggaaagcctctgatgttttg
tcggagtcaccaattccggataattatgtgggttcgacaaatagttacttttcatctatc
tcaaaaagagaacttgcatacgactcaacgccagaggataacaaaaatccgtataagtct
ccatcatcacctgcaaaacagtgtggtgctagcgatgcacaatgggcagctgctttacaa
gctactccatcgacacagcaaccgaaacgaatcgtctatactccaagtcgttttgatcct
agttccacaccatcttggacgcatattagacgagcagcgaattcatcacgtacaccgttg
tttgttaaacagcctattgggacagattcacggtataaacggcaagcttcctcacttgct
tattctgcagctccgaagattccgagactatctactggacgtcgagcaaacaggtgttct
aagtttggtcgaggtcgaccaagtaaactatcaaggcaacgtatttcaaaatcaagtaga
tcaaattctcctatcacagaacaacattcagataatactaattcaatggaaaaaacactg
aatccgacaagtggacattccgatttcaaagaagatattatcaacacagaactttctccg
ctagattccgatatttctaccttgtcgaatacaataaattcgcctaaatctttggaagaa
acatccgtaaccttaccagagaaagccactgatgatagttctatggcacctaaagtagat
ccaggagatgaaaaacaaactgtatggaatgggaaagactatcccgaccatgattcacca
tgcactcctccattacggaatcctgtaaatagtgattgcctgataacatctactgatgta
ttatcatctagtttagttacttcgccgaagcgactggagaatcgcatgaaatctgttgat
attgaactatctgacttgaaggttttgaacatttcggaaaaaggtacttcatcaggaact
caaaacagtgtacgacttaaaccacaccaatttagacggaaagctcgtggacgaagaaga
gataagtgtagagtttcagcatttaatagtttatttcaaaatcctttgcggaagtgttca
gatccactttccatcaagtcacagaatcgttctttccaaactgttcaaagtctcgaacgt
atacctaaggttgaaaataacgtaaatgatcaccaaactgtttcagtcgtttcagataac
cctttaaaaagttctcgaccgactcggtcagtacataaaacgggaaggcgtacagggcta
aacgcagatgctcctcatgattctctaaaaaatgaacctaccatcacacagtcttcttcc
gatataaaaatggaaactatctgctccccagcatcagatacaactgaacccatgacattt
agtgaaaaagcagaacttcttagaattctctctatagatactagttatgtgaagcacacg
tcatcaaccaccttaaatgtcgtttccaataatcactttttgaagtcagagaattcggta
tttaacaaagaaagctttggtaaattgcaacagcatgcatcaattactttaagatcacta
ccttcttctccgtcatctcttgattcctccctctcctcttcttcttctacttcaaaatat
tcacccgaagaaccactgcttttaaagtcagaaatgaatgacgtgaaaggttgtgataat
tacggaggtgacatttctcaaggtgtaaataagtccttattttcaagttcctgtattcag
aaaactgtcaatgcaaatctatctcctgtagatttttcagattccaaaaaaacctctccg
gccacttcttgcaataataaaatacatactactcataatgcctctccaccggtggatgca
ttaggagttggaccaccacctctccttcctttatctagtaaatcggccgatcaaaagcga
tgttcttcctctttgttttcaacatccactgaaagtgatcatatcgtggcacttcctccc
accttgatgtcttccagacagtcggagctagtgtcgacttccagcagttgcttctttaca
aattcacagccattgtcatctaagcaaatcagcgataaaaatgggggattacgtattaca
attaaactaggcggcgggacattaaacgaagaacatcttgcttcatctctttccccttca
tcttcttccttatcctcatcagagtcaacttcaggagatgaagacaattcaacaactcat
tacatacagtcacaaagttcaacccagatattcaaaagggaaccaaatgaaaatagtgtt
ttgaacccagtggataaggacagaccaagtagccattctgcatcattgtctcagtcgaca
acatttacagaaaaaacaccaaagcttgttattcgcctcgggaatggtccaactgcagca
tctcagtcacagactattgcacctacacatattcagtcggttagtcaaaatctgacaaat
tattcagaaaatcccacttcagttatcgacaagaagcattcaagttctttaataacccca
ccacctcctttacaattgaccatctctcgcgatagactaaaatatagaggccgcactgct
tcacaaggtagcgattcaaatgcatcaaattcgagttcaacaattacaggaagtctttca
agtagtgaagaagaagtagttgttcatcctcacattagtcctacggggactgggagttta
ccaccgcctccttctttggaacgcttgccacctcgaccaggtcacgatggtttcctaacg
aataaacctaccactcaaagacattcaattcatcattctcagttgccacctccatcccta
acaagcagtataaacaaatcacacagtatttcgcctttaaaacagatggtttcaccaggc
acagttatatcaaatggtcctaatcctaccgctactcattgtcacctcccacctcttctt
ccgttattttcttcgatttcggaacaaatagagtctgtctcacagtcatctaagtcaatt
ccagtttcaacagaacagtctttacatagtgacaattcaaaatcaacttcacgtctcggt
gacaggagaaaacgaaggcttactgatcaagattctcgtttacctctagccaagcgaaaa
acattgatccagtcttctgcagttcattcaccaaaaactgaatcaattgttaagagacca
cgtgcaacagtggattctgtttttacagatgatgaaagtgatgctaaaaacgaagaaaaa
tctctgttatcacttacagcttcatgttcaaatgactcagttaataaccaaaaatccttt
cgtccatctaacagccaaaatatgtatatatctaatccccctgcaaattccttagctccc
tctcttaattctactctatctcctttgaaaactcaaccacgaacaaaacacactggtttg
tataacaaaaagtctttatatcgtcctgctaccaaatcatcgtctcataccagtagtacg
aaaagttctgtatcacttaaaagtgggaaagttcgtggccgatccaaactcatacccgcg
tcaccaaccaaaactccatcaagtattaacatctcttccaaaatagttcaacgtgaatct
gcttcacaaatcgttgttgagtctgctggcagctcatattattttaataatgatggtgag
caaatatggttatgtcctatttgtttattggaagatgatggcaatttgatgattggctgt
gataattgtcaagattggtaccatagcacatgtttaggactttccaaggctcctgaagtt
cctcaatggttttgtccgaaatgttcacaaaaaccattaccaccaaatacgcttataaaa
ttggcaagtaaagattctgttcctcatcttacaaaaggcagctcacgtggttctgtaacc
actcacccgaacgttacgcactctaaacgtgaatcaggagaatatcttactggatttcga
aaaagaaagcttgaacgtaaagaaaggggacgcaaagcagcagaaaaacaattaaaagat
gagattaaggctgttaaggacaaatacagagaggctgctcgtcaaaaacttgaaaatatt
cagttgcctgggtctctagattgtgttgaaaacatcctttccagtgacaaacaggttatt
ggagaccatagtgtcgttattcaagaattagatttatgtaactcccattatttcatgggt
gcttgcaaggaacgaaattctgatccaatcatttctgctgaagagccacatatgtcgctt
aaaaaagcactcaaaatgaatcccatgaggagtaaaaaacgttttcgccgttcaaagaaa
caaacctccaaatataaacgtcggaaatatctttcggacatcttagttataaatgtgaga
aaaactcattgggtgagcgtgaacaaccggtaa

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