Schistosoma mansoni: Smp_128120
Help
Entry
Smp_128120 CDS
T01095
Name
(RefSeq) putative polybromo-1
KO
K11757
protein polybromo-1
Organism
smm
Schistosoma mansoni
Pathway
smm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Smp_128120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smm03021
]
Smp_128120
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_128120
Transcription machinery [BR:
smm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
Smp_128120
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
Smp_128120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
8353609
NCBI-ProteinID:
XP_018650491
UniProt:
G4VD97
LinkDB
All DBs
Position
2:27308838..27346259
Genome browser
AA seq
2120 aa
AA seq
DB search
MPKRNNPESPTDSVTGVSGDESQSSSVTTRKRCRLANASQLDLCQELFDRIRAYRGEDGS
LSETFMRLPTRRSNPDYYEAVREPMDLARIQAKIKACEYESVDQMATDVNLIVANTKAFY
PASTTEFAKAVELQDVFDHERQVLQAITTKSTDSITSSTSSSVTDRRATRRRLFVNEERD
EEEAETLSIAASDDSRIAPSEVSTTNLTSSQPGSTQLDNPYELLFASIAKYVGENDRPLA
PTFTHLPSRELYPVYYVVIKEPIDLRMIARRISSGKYNSMDELERDFLLLARNAKTFNEP
KSVIYQDAATLSRILKGKRSEAEHPPVRTNRERGKRASRLNYIPHEVVEQFASMADLSDP
PDSSSQIDESTEAAFELSGDDEDTRATGTSQSCSSIASISTKKKRGRPRRNPYPEDTIKR
SPSREPLSPASIPSQYSTSATGELGGTNLPHSCASRAHRRLQEKLLQVVLDALDEDGQPM
STPFFRLPSRRLYPDYYEEITNPLCLSSIKKKIKRYEYPSLDTVLMDLDVVFNNAQQYNV
EQSAIHQDSIRLQEIAHKKCVELKNSEIALNIKPDNPDTVPFSPNGSNLTVSSTTLSEGI
NYPQYDQTPLRRPGNQIVTEEEATLKRLQNLYKTVYYFRANDGHYPRDTFVSLPSKDVHP
DYYQVISNPIDLTMIKHKMDEGKYSSHDEMVLDLQLMFDNACNYNEEGSSVYNDAKLLDS
IVKKRLRTFVSYSGSVNRPITSRSSLTTEPLTQQLDSSNIQSHASLVNTVPAVHHQQSGQ
PTCSLLQRVMLELFQAVREYQINGRVLSNPFMRLPTRNELPTYYEFIKKPIELQTVAKQL
VQMKYTDFEEFAGELFLMFDNACRFNEPDSQIYADTLILHRVCLAKRSLLLSAHQQALSI
PPCIAPDVATGLRRLLTNLHNAMLTACDADGRGLVDSLIAGDGTESMLTSVTAARLAALH
RAVAEGSYHRLDSLQSDWLGILARARIGEGSDQPADVKNPCPTKQQRLDAAELAHRWVRL
RDELCHRQQRRSGTQTSPSNDSGSVLPSHVVLYSPALSYTEAALERDITEENANHKLPVY
DDENGEETLNPLSDGECELKHFEARGQTYHVGDYVYIEPMRPNVTQCHIGRITRISRVEH
SLSKIEESVPNKEDQSKRENSCDNIESSVKVDHPCTINVRLAMYLRPAEAHPSRRRRLLA
AEVFRTALGETVQINQIMGRCLVMHISQFIRYKPKNLEERDVFICESQFSITSQLFVKVK
DWNIPLPTGIELEARPTPFVPTRLPPNEPLGNALEQVNSSLFVQMHYPLPQTLKSIVLED
LTETEGTVVYEQYVHENGFSVKLGDFLYVPSTNGSSERSIVRVDKLWKSCAQNVILFTGP
WFVISSAVDHLPTRLFYPKEVFLTGADHATHALASATGKCYVMRPCDYSQARPTEIPEQD
IYMCDSKYFETEKVIRKLKKGLKKFQFTSNDIHEDEFYFFPQQIMPRKDASPLLAQASTE
PLQNDQLNRPLSLAFTCVLAAAAGTTTNMVAAPLISLPNLSPVDAAKQTDRISTGLIGES
SGSSPLIGHSTTPGVGRTPVNVLPTSSNALVHGITSPAQIDALTRAFIENNVDRTGKKRK
IRKPPSGYVLYAGEIRKKLLQERPDAPFGEISREVGLLWRQMPTAQRDLYEQKAHLIRQH
MAEEEMQMKAREQEQVQLHIQQQIAATCISSLNISGTIPLQSSATAINPPSSSRMPVTAT
AATMQFYQTPSGQVIQIVHASSTTPSVVGHNALPSQTVTASPAQPANIVQTTYATIPAIA
SACPVATPTHQVVYQLSNQQHGILPNGTVGSGTPQQPFYQPQLHPQTQQQPQRLLVASSV
CSTPTIMGTVIGSGTTVPPVLPVGTNTGPSMPNVQQAQILLGSTGSVSSTGFPALAQGGL
VTTTTPTLNQPMLHPGVAVAAVGAPHIVQPPGPTLGACSQDYAPQVQPQYQLVQQVPQSQ
PIAPNVMASVSVVPGTQFIQSQPQTIPTQPQTGRPSSPIFVSVPPRTSRVLHSEIYQRYI
SRLRKNAPGGLGDWHNQLSASVDTAAPVQPNIANQLIGNFFTDPKKVQSCSVTEALWNLR
DYLLEDALKIRLRCLNAAEC
NT seq
6363 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgcaacaacccagaatctcctactgattcggtaactggagtgtcgggagat
gagtctcaatcgagcagtgtaacaactcgaaagcggtgtcgtttggctaatgcttcacag
ttggatttgtgtcaagaactgtttgatcgaattcgggcatatcgtggggaggatggctca
ttatctgaaacatttatgcgtctaccgacaagaaggtcaaatccagattattatgaagca
gtaagagaacctatggatttagcccgtattcaagcaaaaattaaggcatgtgagtatgaa
agcgtcgatcaaatggctacggacgttaatttaatagtagccaatacaaaagcattctat
ccagcctcaacaaccgagttcgccaaagctgttgaattacaagatgtttttgaccacgag
cgtcaggtgcttcaagcaataactaccaagagtactgattccattacaagttcaacaagc
agtagcgttaccgataggcgtgcaactcgcagacgtctattcgttaacgaagaacgagat
gaagaagaggctgaaactttgtcaatcgcagcttcagatgattcacgtattgctccatca
gaagttagcactaccaatttaacatctagtcaaccaggttcaacacagttggataatcca
tatgaactattatttgcttctattgcaaaatatgtaggggaaaatgatcgtccattagcc
ccaacatttactcatctaccatctagagagctttatcccgtatactacgttgttatcaaa
gagccaattgacttaagaatgattgccagacggatttcgtctggaaaatataattccatg
gatgagttggaaagggattttttgctgttagctcggaatgctaaaacttttaacgaacca
aagtcagttatctaccaggatgcagcaacattgtccagaattttgaagggtaaacgtagt
gaagcagaacatcctccagttcgaactaaccgagagcgtggaaagcgtgcatctcgttta
aattacataccacatgaggttgtggagcagtttgcttcaatggctgacttatctgatcct
cccgacagttcaagtcaaatagatgaatctactgaagcagcttttgaactttctggggat
gatgaagatactcgagcaactggcacatctcaaagctgttcatcaatagcttcaatttcc
acaaaaaagaaacgtggacgccctcgtcgtaatccctatcctgaagatacaataaaacga
agtccatcaagagaacctctttctccggcaagcataccttctcagtatagtacaagtgca
actggtgaactaggtggaactaatttaccacattcatgtgcttcaagagcccatagacgc
ttacaagaaaaacttttacaagtcgtattagatgctcttgatgaagatggtcaaccaatg
tcaacaccatttttccgacttccttctagaagattatatcctgactactatgaagagatt
accaatccattgtgcctctcgagtataaagaaaaaaattaagagatatgaatacccttca
ttagatactgttctcatggatttagatgtagtattcaacaatgctcaacaatataatgtg
gaacaaagtgcaatacatcaggattctattcgtttgcaagagattgctcataaaaagtgt
gtagaacttaagaattcagaaatagcactgaacattaaaccagataatccagatacagtt
ccattcagtcctaatggaagtaatctaactgtatcatcaactacactgtcagaaggcata
aattatccacaatatgatcaaactccacttagacgacctggaaatcaaatagttacagaa
gaagaggctactttgaaacgactacaaaacttatacaaaactgtttactattttcgtgca
aatgatggacattatcctcgagatacatttgtaagcttaccatcaaaggatgtacatcca
gattattaccaagtaatttctaatccaatagatttaacaatgattaaacataaaatggat
gaaggaaaatactcgtcacacgatgaaatggttcttgatcttcaattgatgtttgacaat
gcttgcaattataatgaagaaggttcgtcagtttataatgatgcaaaacttttggattct
attgttaaaaagcgcctgaggacttttgtctcatatagtggcagtgttaatcgaccaata
acttcgcgtagttcacttactacggaaccgttaacacaacagttagacagttcaaatatt
cagtcacatgctagtttagtcaatactgttcctgctgtccatcatcaacagtctggccaa
ccaacttgttcactcttgcaacgggtcatgttggagctttttcaggcagttcgtgaatat
caaatcaacgggagagttttatctaatccgtttatgcgtttaccaactagaaatgagctt
ccaacttattatgagtttattaagaaacccattgaattacaaactgtggctaaacaattg
gttcaaatgaaatatacggattttgaagagtttgctggtgaactttttctaatgtttgac
aacgcatgcagatttaacgaacctgattcgcagatttatgcggatacactgatacttcat
cgggtatgtcttgccaagcgatcattattattatctgcccatcagcaggcactctcgata
cctccatgtattgctcctgatgttgctactggcttacgccgtctgctgactaatcttcac
aatgcaatgttaacggcttgcgatgcagatggtcgaggattagtagattcattaatagct
ggtgatggtactgaatctatgcttacttctgtgactgcagctcgtttggctgcacttcat
cgtgcagtggcagaaggctcttatcatcgtctagatagtcttcaatcagattggcttggg
atattagctagagcccgaatcggagaaggatctgaccaaccagcggacgtgaaaaatcct
tgccctactaaacaacaacgattggatgctgctgaattagctcaccgttgggttcgtctt
agggacgaattatgtcatcgtcagcaacggagatcaggaactcagacctcaccaagtaat
gattctggatctgtattaccttctcatgtggttttgtacagtcctgccttgtcgtataca
gaagcagccttagaacgtgacattactgaggaaaatgcaaaccataaacttccagtttat
gatgatgaaaacggagaagaaactttaaatccactttcagacggagaatgcgaattaaaa
catttcgaagcacgtggtcaaacctatcatgttggagattatgtgtatattgaaccaatg
cgacccaatgttactcaatgtcatattggtcgtataacacgtatcagccgggtagagcat
tcgctgtccaaaatcgaagaatcagtacctaataaggaagatcaatcgaaaagagaaaat
agttgtgataacattgaatcatctgtgaaggttgatcatccttgtacaattaatgttcga
ctggctatgtatttacgaccagctgaagcacatccttcacgtcgaaggcgtcttttagcc
gctgaagtttttcgtacagctctcggtgagacagttcaaattaatcaaataatgggacgt
tgtcttgtgatgcatatttcgcagttcattcgttacaagccaaaaaatcttgaagaacgt
gatgtatttatttgtgaatctcagttctccattacatctcagttatttgtgaaagtcaag
gattggaatattccacttccgactgggattgaattagaagctagacctactccatttgta
ccaacacgtttacctccaaatgaacctttaggaaatgccttagaacaggttaatagcagt
ttgttcgttcaaatgcattatcctttgcctcaaacattgaaatcaattgttcttgaggat
cttaccgaaactgaaggaactgtagtttatgagcaatatgttcatgagaatggattttca
gtgaaactaggcgactttctatatgtcccctccactaatggatcttctgaacgttctatt
gtacgagttgacaaactatggaaatcctgcgctcaaaatgttattttatttactggacca
tggttcgttatttcatcggcggtggatcatttaccaacacgtttattttatcctaaagaa
gtttttctcactggggctgatcatgctactcatgcgcttgcttcagctacagggaaatgt
tatgttatgcgtccatgtgattactctcaagcccggcccaccgaaataccggagcaagat
atttatatgtgtgattcaaaatattttgaaactgagaaagtaattcgtaaacttaagaaa
ggattaaaaaaatttcaatttacatcaaatgatatacatgaagatgaattttatttcttt
ccccaacaaatcatgcctaggaaagatgcatcacctcttttggctcaagcatccactgaa
ccacttcagaatgatcaattaaatcgcccactgtctctggcatttacttgcgtacttgca
gcagcagccggaactactaccaatatggttgccgctccattgatttctcttcctaattta
tcacctgttgatgcagcgaaacaaactgaccgtatatctactggattaataggtgaaagc
tctggatctagtccacttataggtcatagtacaactccaggagtcggccgcacaccagtt
aacgttttacctaccagtagtaatgcactagttcatggtataacttcaccagctcaaatt
gatgcacttactcgtgctttcattgaaaataacgtagatcgtacaggtaaaaagcggaaa
attcgtaaaccgccgtcaggctatgttttatacgctggcgaaattagaaagaagttatta
caagaacgtcctgacgctccattcggtgaaatatctcgtgaagttggtcttctgtggcgt
caaatgcccactgctcaacgtgatttatatgagcaaaaagctcatctaattagacaacat
atggctgaagaagaaatgcaaatgaaagccagagaacaagaacaagtacaacttcacatt
caacagcaaatagctgctacatgtatttcatcacttaacattagtggaaccatacctctt
cagtcttctgctacagcgattaatccgccttcttcatctagaatgcctgttactgctaca
gccgctactatgcagttctaccaaacaccaagtggtcaagtaattcaaattgtccatgcc
tcctcaacaacacctagtgtagttgggcataatgcgttgccatctcagacagttactgca
tctcctgctcagcctgctaatattgttcaaactacatatgcaacaatacctgcaatcgct
tcagcctgtccagttgccactccaactcatcaggttgtttatcagctttccaaccaacaa
catggcattcttccaaatgggaccgtcggttctggaacaccacaacaaccattttaccaa
ccacaacttcacccccaaactcaacaacaaccacaacggcttttggttgcatctagcgtg
tgttctacacccactataatgggtactgttattggatcaggaactactgtaccacccgtt
ttacccgtgggtacaaatactggtccttctatgcctaacgttcaacaagcccagatactt
ttaggttcaacagggtctgtatcttcaacagggtttccagctttagcacaaggtggttta
gtaacaacgacaactccgacattaaatcaacctatgttacacccaggcgtagctgttgcg
gccgtaggtgctccacatattgtgcaaccacctggaccaacattgggagcttgttctcaa
gattatgcgccacaagtacaaccgcagtaccagttagtacaacaagttcctcaaagtcaa
ccaatcgctccgaatgtaatggcttctgtttcagttgttccaggaacacagttcattcaa
tctcaaccccaaaccattccaactcaacctcaaacgggccgcccatcttctccaatattt
gtatcggttccacctcgaacttctcgtgtacttcattctgaaatttaccaacgttacatt
agtcgtttacgtaagaatgcaccgggtggattaggtgattggcataaccaattatcagct
tctgtagatacagctgcaccagttcaaccaaatatagctaatcaattaataggaaatttc
tttactgatcctaaaaaagttcaaagttgttcagtaactgaagcattatggaatttacgt
gattatttattagaggatgctttaaaaattcgtttacgttgtttaaatgctgcagaatgt
taa
DBGET
integrated database retrieval system