Schistosoma mansoni: Smp_128490
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Entry
Smp_128490 CDS
T01095
Name
(RefSeq) putative tomosyn
KO
K08518
syntaxin-binding protein 5
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smm04131
]
Smp_128490
Membrane trafficking [BR:
smm04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
Smp_128490
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
Smp_128490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
UL141
Motif
Other DBs
NCBI-GeneID:
8355177
NCBI-ProteinID:
XP_018654531
LinkDB
All DBs
Position
W:complement(23958186..23993751)
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AA seq
700 aa
AA seq
DB search
MHFCSDSRKLLTASSTHTCLLHFSRREINLETSVLDINMAYDGLDDIGFAYSTGDTFSDD
HLNTAENVFGNVTKDTVQQSLPHVSSGSVSSYQSASPTDRDLRVFVPVRQGSHHWPPGYQ
PLLVCRVGILGLSFESNLKSSTDPTASCLIPPPSITAISMSSAFGLMAIGSEFGIAVVDY
VHKFCLLSISSSDLLNNSSAGSTSLANTCIINNQTAMKNVHSNSDAVQSSESSSTGYTTR
YVLTRATTVKSELKRAKSQEKCSDLSQFSHPGSLTASSSSLDNLNCETIKTILFSEWISP
RQASLYRLRGDIIHISLLDNTGDILPSPSERWDDSYISKGGTASELSKQASLISCSSICS
EGTSIHTNADAYSSTDTGFKSCGGGGSVRALKESVMRQNTITTHTSLTSTSGHSSTILSN
TMSGGGSTFQSSGTTGLDSPTTSKGFIECDRQLLVLCSEKQARVVALPSQNCLYKVKITE
TSQVVRASVQRLRPSHNSGTSTASFLACYLANGHFVAFSLPSLRLLMDVDYLPYTECVSR
SFAFGQYGQSVYLVSPSELAKVTWASDVCANLRDMQGEIFLPSNMPEPPKKNFFKNLLSG
TLVSSLDRDELFGEASSGKGTPGATTLLPNARIEKLSGQTGAASSEIARARNAAIERGER
LQQLDLQTQEMADQAKGFGRSAAILAAKYEKKDKRWGLPF
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgcacttttgctctgattcccgtaaactattaactgcaagcagtacccatacttgttta
ttacactttagtcgtcgagaaataaatcttgaaacttcagttctggatatcaatatggct
tatgatggattagatgatattggtttcgcctattcaactggtgatactttctctgatgat
catttgaatactgctgaaaatgtatttggtaacgtaactaaagacactgtccaacagtca
ttgcctcacgtatccagtggaagtgttagctcttatcaatctgcgtctccaactgataga
gatttacgtgtattcgttccagtacgtcaaggtagccatcattggcctccaggctatcaa
ccacttcttgtttgtcgtgtaggcatacttggactaagctttgaatcaaatctaaagtca
agtactgatcctacagcttcctgtcttatccctccgccatctattacagctatcagtatg
agttcagcttttggtttaatggctattggaagtgaattcggcatcgctgttgtggattat
gttcacaagttttgcttgctgtctatttcgtcttctgacctattaaataatagttcagca
ggctcaacttcgttagctaatacatgcatcataaacaatcagacagctatgaaaaacgtc
cactcaaattcagatgctgtacaatcaagtgagtcatctagtaccggctatacaacacgc
tatgtattaacaagagctacaactgtcaagagtgaattgaaacgtgccaagtcccaagaa
aagtgttccgacctttcacagttttcacatccgggaagtttaaccgcaagttctagctca
ttagacaacctaaactgtgagacaattaaaacaattttatttagtgaatggatatctccc
agacaagcttctttgtatcgtttacgtggagatattattcacattagcctgttggataat
accggtgatattttaccgagtccttctgagcgttgggatgattcatatatttccaaaggt
ggtactgcctctgaactttcgaaacaagcatctcttatatcttgttcatctatatgttct
gaaggaacttctatacatactaatgctgacgcatatagttcaactgatactggcttcaag
tcttgtggtggtggtggcagtgttcgagcattgaaagagtcagttatgcgacaaaataca
attaccacacatacatctttaacatcaacatcgggtcactctagtactatactatccaat
actatgagtggtggtggtagtacatttcaatcaagtggtacaactggacttgattctcct
acaacatccaaaggttttatcgagtgtgaccgacagctgcttgttctttgttcagaaaaa
caagctcgagtagttgcacttccttcacaaaattgtctttataaggtcaaaataactgaa
acaagtcaagtggttcgagcttccgtacaacgtttgagaccgtcacataatagtggaaca
tcaacagctagtttcctcgcgtgttaccttgcaaatggacattttgttgccttctcattg
ccgagtttacgtttactaatggatgtggattatttaccgtatacagaatgtgtaagccgt
tcgtttgcgtttggtcagtatggtcaatctgtgtatttggtgtcgccttcagaattagct
aaagtcacctgggcatcagatgtctgtgcgaatttacgtgatatgcaaggtgagatattt
ctaccaagtaatatgccagaacctcctaagaaaaactttttcaaaaatttgttaagtgga
actttggtgtcttcattagatcgagatgaattatttggtgaagcaagttcggggaagggg
acacctggcgctactactctactgccaaatgctcgtatagaaaagttatctggtcagacg
ggtgctgcctcctctgaaattgcacgggctagaaatgctgccattgaacgtggtgagcgg
ttacagcagttagacctacaaacgcaagagatggctgatcaagctaaaggttttggtcgt
tctgctgctattctcgctgccaaatatgagaaaaaggataaacgctggggtttgccattc
taa
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