KEGG   Schistosoma mansoni: Smp_129760
Entry
Smp_129760        CDS       T01095                                 
Name
(RefSeq) hypothetical protein
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
smm  Schistosoma mansoni
Pathway
smm03018  RNA degradation
smm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Smp_129760
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Smp_129760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smm03019]
    Smp_129760
   03041 Spliceosome [BR:smm03041]
    Smp_129760
Messenger RNA biogenesis [BR:smm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Smp_129760
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     Smp_129760
Spliceosome [BR:smm03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    Smp_129760
SSDB
Motif
Pfam: LSM KOW7_SPT5 LSM14 SM-ATX
Other DBs
NCBI-GeneID: 8346437
NCBI-ProteinID: XP_018655384
UniProt: G4VS32
LinkDB
Position
W:complement(49166435..49169171)
AA seq 87 aa
MSLTGPQLLPLELVDKCIGSKIHIIMKNDKEMVGTLLGFDSYVNMVLADVTEFEFTAQGK
RITKLPHILLNGSNIVMMVPGGEGPEI
NT seq 264 nt   +upstreamnt  +downstreamnt
atgtcactgactggacctcaacttcttccccttgaactggttgacaaatgcataggttcc
aagattcatataatcatgaaaaatgataaagaaatggtgggaaccttgcttggctttgat
agttacgtaaacatggtcttggctgacgttactgaatttgagtttacagcccaaggtaaa
cgtataacaaaactgccacatattttgctgaatggtagtaacattgttatgatggtgcct
ggtggagaaggccctgaaatttaa

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