Schistosoma mansoni: Smp_130790.1
Help
Entry
Smp_130790.1 CDS
T01095
Name
(RefSeq) eukaryotic release factor 3-related (erfs) (hbs1-like)
KO
K14416
elongation factor 1 alpha-like protein
Organism
smm
Schistosoma mansoni
Pathway
smm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Smp_130790.1
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_130790.1
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
Smp_130790.1
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
MMR_HSR1
G-alpha
Motif
Other DBs
NCBI-GeneID:
8349335
NCBI-ProteinID:
XP_018654460
LinkDB
All DBs
Position
W:complement(21716004..21735557)
Genome browser
AA seq
654 aa
AA seq
DB search
MSRHRNVRALYDDDVDTYDEAFASSVDDDYTISPNTSERYIFNPDSVFKQDISVSLTNVK
PLKDSPGVVSGRIGSYQGFDFSVPRNNEVTNQNDSVHGSDEVFGNSDLFDSTLGVPQARP
TEEVNRADTSLLNLSLSQKLTISSHSDERSNFLRTPGNNSATPSKPIDRHSLVSEYSKLH
KESAEKQIINLIVMGHVDAGKSTLMGNLLCLLGHVSSKQLAKYQWDAQKLGKASFAYAWI
LDQTSEERNRGVTMDIAQTSFETKSKRVALMDAPGHKDFVPQVIGGATQADAALLVINAT
RGEFETGIGAGGQTREHARLARLLGVSRLIVAVNKMDTVEWCQSRFNEIQTQISSFLKSM
NFSGVMYCPVSGLVGANLVPQNLSSSSKNASDTSSNLFTWYTGPSLLELIDSIPPPERTV
DGPFRFVVSDIFKPAGSSVPMVAGRVISGAISSGVNIPTSKVICLPSDVRTCVKSIRSLC
NTRTSQNDAEGDLGGKLLDQVVKFAFSGDQVALMLTDIDPFQTLIPGDLLTDPDNPIQPS
TCISAKLLVFSIQQPITKGYPVIYYYNCANVAATITKLKSMTHRENKIEKVVRKPRCLLG
NCTANVELTFERPICIEVYEKCKPLGRFMLRVGGESIAGGTVTKIIPSKKESSS
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcacagaaacgtaagagcattgtatgatgatgatgtagatacttatgacgaa
gccttcgcaagttcagttgatgatgactatacaatttccccgaacacatcagaacgatac
atatttaatcctgacagtgtattcaagcaagacatatcagtatctttaacgaatgtcaaa
ccactaaaagattctcctggtgttgtgtctggacgaatagggtcttatcagggatttgat
ttctccgtaccaagaaataacgaagttacgaatcaaaatgatagcgtgcatggctctgat
gaggtgtttggcaacagtgatctttttgattcaactttaggtgtacctcaagcacgtcct
acagaagaggtcaatcgtgctgatacgtcattattaaatttatcactttctcagaaattg
acgatctctagtcattctgatgaacgttctaacttcttacgtaccccgggcaataattca
gcaactcctagcaaacccattgaccggcattctttggtaagcgaatattctaaattgcat
aaagagtcagcagaaaaacagattatcaatcttattgttatgggacatgtggacgctggt
aaaagcactctaatgggaaatctactatgtttgttaggacatgtttctagtaaacaatta
gctaaataccaatgggatgcacaaaaactaggcaaggcatcattcgcctatgcatggatt
ctagatcaaacttctgaggaaagaaatcgtggcgttacaatggatattgcacaaacttca
tttgaaacaaaatcaaaacgagttgctctaatggatgctcctggacataaggattttgtt
ccacaagttattggtggtgcgactcaagctgatgctgctctcctagttatcaatgctact
cgaggggaattcgaaactggaattggtgctggaggtcagacaagggaacacgctcgatta
gctcgtttactaggggtttctcgtttaattgtcgctgtaaacaaaatggatacagtagaa
tggtgtcagtcacgattcaatgaaattcagacacaaatatctagttttttaaaatctatg
aatttttccggagttatgtattgtccagtgtctgggttggtcggagctaacttagtacct
caaaatttgtccagtagcagtaaaaacgcttcagatacaagttctaacctgtttacgtgg
tatacgggaccttcgttactcgaacttattgattcgattccaccaccagaaagaactgtt
gatggaccttttcgttttgttgtcagtgatatatttaaacctgctggttccagtgtaccg
atggttgctggacgggttatatctggagctatttctagcggtgtaaatatacctacaagt
aaggttatttgcttgccaagtgatgtacgaacttgtgtgaaatctatcagatcattgtgt
aatactcgtacaagtcaaaatgatgctgaaggtgatcttggaggcaaattgttagatcaa
gttgttaaatttgcattttctggtgatcaagtggcattgatgttgacagatattgatcca
tttcaaactcttattcctggtgatttacttactgatccagataatccaatacaaccatcc
acttgtatttcagctaaattattagtattctctatacaacaacctatcacaaaaggttat
cctgttatatactattataattgtgccaatgtagcagccactatcactaaattaaaatct
atgactcatcgagaaaacaaaatagaaaaagtcgttcgaaaaccaagatgtcttcttggt
aattgtacagcaaatgtagagttgacatttgaaagaccaatttgtatagaagtttatgaa
aaatgtaaacctcttggacgatttatgcttcgtgttggcggtgaatcaattgctggtggt
actgtaacaaaaatcattccatcaaaaaaggaatcatctagttga
DBGET
integrated database retrieval system
