Schistosoma mansoni: Smp_133120.1
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Entry
Smp_133120.1 CDS
T01095
Name
(RefSeq) putative dead box ATP-dependent RNA helicase
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smm03041
]
Smp_133120.1
Enzymes [BR:
smm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Smp_133120.1
Spliceosome [BR:
smm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
Smp_133120.1
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
8351761
NCBI-ProteinID:
XP_018647964
UniProt:
G4V8E4
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All DBs
Position
1:complement(16674387..16677826)
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AA seq
875 aa
AA seq
DB search
MPYYRFSRFRSPRRRGFFGGGRRLRSVDWSAYTLAKFEKKFYHECSSVRDRSRRDVEEFR
SKHKVTVLGHNVPRPLFKFSEAGFPSYIMSVIKKSKWDSPTPIQCQGWPVALSGRDLVGI
AQTGSGKTASFLLPAIVHAKAQPSLKRGDGPIVLILVPTRELAQQVEKVAEDFCYSAGFK
SACLYGGASRTGQAEALGQSPEVVIATPGRLLDFLESRHTNMRRCTYLVLDEADRMLDMG
FEPSIRRVVSQVRPDRQTLMWSATWPREVKALAEDFLYDYIQINVGSTKLSANHNIRQHV
EILNESEKFKRLLSLLNSFDNARVLVFTETKKRTDELCQKLQDKGFDATAMHGDKHQKER
DRALDSHISVLVATDVASRGLDINDVRYIINYDYPSQTEDYIHRIGRTGRSDKKGTAYTF
FSAKQPRLARELIEVLKEARQTIPDELFKIAEGYYVERTRSSGQSYRRSRSGSSRSVSSG
KRSISKRSRSSASRHSRSHSSRSGTSYRSRSPQTKGYHSRARSKSLSRNGNGAASDESKV
SSPRERRSYGSHTPPKRKDRSQSSQYSKDAYREESNHHRSSSDGSPSKRIKERSHSSRSS
HSGKHKYSHSPQREDVERTHSASSGGRSASRHRSQSSVHSRSKSSSVKRSQRESNRSSVS
HNSHQSASREHSGSMEHSPARTDPDVADHSSRSVVDVSPADGSLDRHNSSVSDKNESISP
SNSRDVSPQSVTKDESPVAKRPRNDRNSNRHSKSKSRSHYRDSPRNERQSGYKHSGGSRH
DRRGRKEVHDTRDRRSRSSDEYYDGNRRDRSWTPYGDVPSFNYNYKFNYNARYNRNKNFY
RSRSRSSSGWQRRDRSRSRSGRERTPRKVRDNRRR
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgccgtattacaggttttctagattccgctcacctagacgaaggggattttttggaggg
ggtagaaggcttcggtccgtagattggagtgcgtacactcttgctaaattcgaaaagaag
ttttatcatgaatgttcaagcgtgcgtgatcggtcacgtagagatgtcgaggagtttcga
tccaaacacaaagttactgttcttggacacaatgttcccaggcccttgttcaaatttagt
gaggctggcttcccgagttacataatgagcgtaatcaagaaaagcaaatgggattcacct
actcctattcagtgtcagggttggccggtagcactcagcggacgtgatttggttgggatc
gcccaaacaggatcaggaaagacagccagtttcctcctcccagcgatcgtccacgccaaa
gcccaacccagcctaaaacgaggggatggaccgattgttttaatccttgttcctaccaga
gagcttgctcagcaagtagaaaaagttgctgaagatttctgttattcagctggattcaag
tccgcatgtctttatggtggggcatcaagaactggtcaagcagaagctttaggacagtct
cctgaagtagtcatagcaactcctggccgtctcctcgattttctggaatcgagacataca
aatatgcgtcgctgcacttatttagtgctcgacgaggctgatcgtatgttagacatgggc
ttcgaaccttctattagaagagttgtttcacaagttcgtccagaccgacagactctaatg
tggtcagctacgtggcctagggaagtaaaagcattagcagaagatttcctttatgattac
attcaaataaatgttggttcaaccaagttgagcgcgaaccacaacattcggcaacatgta
gagatcctaaatgagagtgagaagttcaagcgtttactcagccttctcaattccttcgac
aatgctcgtgtacttgtctttacggagaccaaaaagcgtacagacgaactttgtcaaaaa
ctccaagataagggttttgatgccacagctatgcatggggataaacaccagaaagaacgt
gatcgtgccctagacagtcacatatctgttctcgttgccacagatgtcgcatctagaggc
ttagatattaacgacgtccggtatataatcaattatgactatccgtcgcaaactgaagat
tacatccacagaattggacgaacaggtagaagtgacaagaaaggcactgcatatacattc
tttagtgccaaacaaccaagattggccagggaacttattgaagtgctgaaggaagcccgt
caaacaattcccgacgagttgttcaaaattgcagagggatattacgttgaacgcactcgg
tcatccggacaatcatatcgtcgaagtaggtcgggttcgagtcggagtgtgagctcaggc
aagagaagtatatctaagagaagtcgatctagcgccagccgtcactctcgatctcactcg
agccgcagtgggacatcatacagatcgagaagtcctcaaactaaaggttaccactcgcgt
gctcggtccaaaagtttgtcgcgcaatgggaatggcgcagctagtgacgagtcgaaagtg
agttcacccagggagaggaggtcttacggttcacatactccaccaaaacgcaaagaccgg
tcacagtcttctcaatattcgaaagatgcctatcgtgaggaatctaaccatcaccgttct
agttcggatggcagtccatcaaagcgaattaaggaaagaagccattcaagtcgaagttcg
cattcgggtaaacataaatactctcattcaccacaaagagaagatgtagaaagaactcat
tctgcatccagtggtggtcgatcagcatctcgtcaccgttcacagtcatcagtccattct
cgttcaaaatcaagtagcgttaaacggtcccaacgcgagtccaataggtcctctgtcagt
cacaattcccaccaaagtgcatctcgtgagcacagtggaagtatggaacattcacctgct
aggactgatcctgatgttgctgaccattcttcacgttctgttgtcgacgtgagtccagct
gatgggtccttggaccgtcataattcttcagtatctgataagaatgagtcgatctcaccc
tcaaactcaagggacgtttcaccacaatctgtaacgaaagatgaaagtcctgtagctaag
agaccccgaaatgaccgtaactccaatcggcattctaaaagtaaaagtcggtcgcactac
agagactctcctagaaatgaacgtcagagtggttataaacattctggtggatctcgtcat
gatcgaaggggacgcaaggaagttcatgatactcgcgaccgtcgttcccgttcctctgat
gaatactatgacggtaaccgtcgagaccgatcttggacaccttacggagatgtaccttct
ttcaattataattataaattcaactataatgcaagatacaatcgtaacaagaatttctac
cgttcacgctcacgttcatcatcaggatggcagaggcgagaccgaagcagaagcagatca
ggtcgcgaaagaactccaaggaaagtaagggataatcgcagacgataa
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