Schistosoma mansoni: Smp_133620
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Entry
Smp_133620 CDS
T01095
Name
(RefSeq) putative leucine-rich repeat-containing protein
KO
K10641
E3 ubiquitin-protein ligase LRSAM1 [EC:
2.3.2.27
]
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smm04131
]
Smp_133620
04121 Ubiquitin system [BR:
smm04121
]
Smp_133620
Enzymes [BR:
smm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
Smp_133620
Membrane trafficking [BR:
smm04131
]
Autophagy
Xenophagy
Other xenophagy associated proteins
Smp_133620
Ubiquitin system [BR:
smm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
Smp_133620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
SAM_2
LRR_4
SAM_1
Motif
Other DBs
NCBI-GeneID:
8341088
NCBI-ProteinID:
XP_018650559
LinkDB
All DBs
Position
2:29931497..29960123
Genome browser
AA seq
702 aa
AA seq
DB search
MTAIKYFKKRYVDKYIYLWEITSQFIRRSTTDKCSLHIFIARERPDDIFDLSSCELKMIP
DGTFSLVKVLLKTKLYLQQNSLQKLDSGGKLTCLQNIVLLDISSNEFQQLPDSLYELKCL
QVLNASKNLLSKLPSTITSLSQLLFLNVEDNRLTELPSEFGKLQQITKLYLKNNPLSSLP
KQLCYLKELKELTLSCDHIQYPTSDICKLGLEAIMDYLSKEEGMKCCNVVANHTNVVSNY
TSTNKNNTSNEMNERKMQSYSNNTSTPSSSSLTNYTQKRKEENLLALELERQSLESRWTE
QEFSAKLNQNKQILVQLAEEEARVCAELSAIQDKRKQQRCALISNVTLAEQNAADIIKQI
LAINKSAKLIEKMEDVFNAHQFSSTDYTSLSQSKRNEILASMQEMLLVTDNAYAIHTMNL
NSIKLHSLSNNQDFTSEYVQQILANKRADHTKLTFNLMLEESVQKEAFAQLQRQKDSQAV
RLQKEICLIEEELCRLTLAERSRINQRTEVNQRVLDECRSELLQLLTQLLDEQQDRQKEL
RKRLEEIEQQKKDNQLDFWLVQYQRVLNSKPVELLDKPDSDVQIILSNAQSLEFLPNFQR
HAITYSIMQTMTDSDLKEIGIHALGARREILRQIGLYKMKTNDEDKTLNTIESLPIPYVT
PSAPEATLSSIVVSDEVVARMENECCVCQDAIVSGTLFYTFC
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgactgctatcaaatactttaaaaaacgatatgtggataaatatatctatttatgggaa
ataacatcacagtttataaggagatcaacaacagacaaatgctcgttacatatttttatt
gctcgagaacgtccagatgatatatttgacctatcttcgtgtgaacttaaaatgattcct
gatggaactttttcgcttgttaaagttttactaaaaacgaaattatatttgcaacaaaat
tctttacaaaaacttgattccggtggtaaactaacatgccttcaaaatattgtattgctt
gatataagttcaaatgaatttcaacaattacctgatagtctttatgagttaaaatgttta
caggttttaaatgcttcaaaaaatctgttatcaaaattaccttctaccataacgtctctt
tctcaacttttatttcttaacgttgaagataatcgtcttactgaattaccatcagagttt
ggaaaattacaacaaattactaaactttatttaaaaaataatcctttatcatctttacct
aaacaattatgctatttgaaagaattaaaagaattaactctttcctgcgatcatatacaa
tatcctacttcagatatatgtaagctgggactggaagcgataatggattatttatctaaa
gaagaaggaatgaaatgctgtaatgttgttgcaaatcatacaaatgtggttagcaattac
acctccacaaataagaataacacttctaatgaaatgaatgaacgaaaaatgcaaagttat
tccaataatacatcaacaccatcatcatcatcattaactaattatactcaaaaacgaaaa
gaagaaaatcttttagccttagaattagaacgtcaatcattggaaagtcgttggaccgaa
caagaattcagtgctaaattgaatcaaaataaacaaatacttgtacaattagcagaagaa
gaagcacgtgtttgtgctgaattatctgctatacaagataaacgaaaacaacaacgttgt
gcattaatttctaatgttacactagctgaacaaaatgctgctgatataatcaaacaaata
ttggcaattaataaatcagcaaagttaatagagaagatggaagatgtgttcaatgcacat
cagtttagttctactgattatacatctttgtcacaatcgaaacgaaacgaaatcctagct
tcaatgcaagaaatgttgttagttacagataacgcttatgcaattcatacaatgaacttg
aattcaattaaacttcatagtctttcaaataatcaagattttactagtgaatatgttcaa
caaattttagcaaataaacgtgctgatcatacaaaattaacctttaatcttatgctagag
gaaagtgttcaaaaagaagcttttgctcagttacaacgccaaaaggatagtcaagccgta
agattacaaaaagagatatgcttaatagaagaagaactttgccggcttaccttagctgaa
aggtcacgtattaatcaacgtactgaggttaatcaacgtgttcttgatgagtgtagatct
gaactactacaattattaactcaattattagatgaacaacaagatcgtcaaaaggaatta
cgaaaacgtttggaagaaatcgaacaacaaaagaaagacaaccaattggacttttggtta
gttcaatatcaacgtgtattgaattcaaaacctgtcgaattacttgataagccagactca
gacgttcaaataatacttagtaatgcacaatctttggaatttttgcctaattttcaacga
catgctattacctattcaattatgcaaactatgaccgatagtgatctgaaagaaattggt
attcacgctcttggagcacgtcgtgagattttgaggcagattggtttgtacaaaatgaaa
acaaatgatgaagacaagacgttaaatacgatagaatcacttccgataccgtatgtaaca
ccatcagctccagaggctacattatcaagtattgttgtatctgacgaagttgtggctcgt
atggaaaatgagtgttgtgtatgtcaagatgcaatagtgagtggaacattgttttacaca
ttttgttaa
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