Schistosoma mansoni: Smp_134790
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Entry
Smp_134790 CDS
T01095
Name
(RefSeq) transcription initiation factor iid, 28 kD subunit-related
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
smm
Schistosoma mansoni
Pathway
smm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Smp_134790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smm03021
]
Smp_134790
Transcription machinery [BR:
smm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
Smp_134790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
Histone
Sigma70_ner
CBFD_NFYB_HMF
RNA_pol_3_Rpc31
DUF3557
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
8346122
NCBI-ProteinID:
XP_018651380
UniProt:
G4VFR3
LinkDB
All DBs
Position
3:21004992..21018238
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AA seq
284 aa
AA seq
DB search
MDPTLKSLYPINDENNNTTQNWSQDPDLTDQNEVPLSTTTVQSVSDDDNQPIVEQPFKKP
KLLNMNIDSLQTKRGEPNVSNIIPVIEQSSVPSSSTHISETVTNQCEVEILTNTNLLDDE
ETVEDDEDEEEVEDDDEEEEDEDDSATVLGDADTESVVSDIISSVLQQEKEARKIEDRKL
LALLAHFDEEQLNRFETFRRATFTKAVVRRLIQSIAPCSVSQNVVIAMAGLTKVFIGELV
EEALNYKEQLGESGPLKPKHIREAYRILSDERRCCTETPENPLL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatcctactttaaaaagtctttatccaatcaatgatgaaaataacaacactacacaa
aattggagtcaagatccagatttaacagatcagaatgaagtccccttatctacaactaca
gttcagtctgtttcggatgatgataatcaacccattgttgaacaaccatttaaaaagcca
aaattgcttaatatgaatatagattcattacaaactaaacgaggtgaacctaatgtatct
aatattattccagtcattgaacaatcatctgttccttcatcatctacgcatatatcagaa
actgtgacaaatcaatgtgaagttgaaattttaactaatactaatttattagatgatgaa
gaaacagttgaagatgatgaagatgaagaagaagtagaagatgatgatgaagaggaagaa
gatgaagatgatagtgctactgtacttggtgatgcagatactgaatctgttgtcagtgat
attatatcatctgtattacaacaagaaaaagaagcaagaaagatagaagatcgtaaatta
ttagctttattagcacattttgatgaggaacagttaaatcgattcgaaacatttcgtaga
gctacatttactaaagctgtagtaagacgactgatacaatctatagctccatgttcagtt
tcacaaaatgtagttattgctatggctggtttaacaaaagtttttattggagaactagtt
gaagaggcattaaattacaaagaacaattaggtgaaagtggaccgttaaaaccaaagcat
attagagaagcttatcgtatattatcagatgaacgacgatgttgtacagaaacgccagaa
aatcctcttttataa
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