Schistosoma mansoni: Smp_135480
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Entry
Smp_135480 CDS
T01095
Name
(RefSeq) putative tetratricopeptide repeat protein 10, tpr10
KO
K16474
intraflagellar transport protein 88
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
smm03037
]
Smp_135480
Cilium and associated proteins [BR:
smm03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
Smp_135480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_14
TPR_12
TPR_8
TPR_7
TPR_19
TPR_6
ANAPC3
TPR_11
TPR_9
TPR_CcmH_CycH
TPR_20
ARM_TT21_C
TPR_10
HAT_PRP39_C
Coatomer_E
ARM_TT21_5th
TPR_15
Motif
Other DBs
NCBI-GeneID:
8351013
NCBI-ProteinID:
XP_018651905
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All DBs
Position
4:10712049..10735422
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AA seq
682 aa
AA seq
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MITDNDDDDLYEGFDNLNTKLEVEEFVNDAGFQNVIKNTSYGRKPPVLDRGLNTSVIRGP
IGRTPTSANFRLVTASGPAGGDFGRPMTSVRAAGYSSMGRRLSTGQPGNQVWLGDQTVPT
TIDVSAVPPLESKSDDSSEERIKNMEKRVNHLVEESCVAACQGEITLALEKAKEASRKER
VLARQREQLGVADQINLDLTYSVLFNLANRYTANGMYQEALNTYQTIVRNKMKVQAENFI
KMAAKIIAPVIESNFSTGYDWCIDHVKMSSYHEIAHDLEIDKAVMFLKQRDFHQAIDTLK
SFERKDTRVACSAATNLSFLYFLEALVNKGNVLYQQQQYERARDCYAEALQDDTRCVEAL
YNLGLVCKQLERYEEALEAFFKLYSVLRNSAPVVYQLMDIYEKLGDSTQAQEWAMQLHGM
VPTDPFLLQRLGDSYEQEGDKSQAFSYYYDSFKYYPCNFDVIEWLGAYYIESQFCEKAIA
YFERASLMQPNQIKWQLMIASCHRRSGNYQQALETYRIIHRRFPENIECLQFLVRLSSDM
DLPEAQDYITKLKRAEKLKQAREQRRLSTSNRRSFGLTNASRTTGSRENSASVSSGGESR
ESSANYDNHFSVQSKHTHSKNNSSRQTEARKETGLSKDIDNEYIKYNDPLGPSVERPRTA
ARTRSIQDDFADEEVDENLLPD
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgattacagacaatgatgacgatgatttatatgaaggttttgataacctcaacaccaag
ctggaagttgaagaatttgtgaatgacgctggatttcagaacgtcattaaaaacactagt
tatggaagaaaaccaccggttcttgatcgaggtttaaatacatcagtcattcgtgggcca
ataggaagaacaccaacatcagctaacttcagattggtcactgcttcaggacctgcaggc
ggagattttggaagaccaatgacatctgtcagagctgctgggtattcatctatgggtcgg
agacttagtacaggacaaccaggaaaccaagtttggttaggtgatcaaactgtcccaaca
acaattgatgtcagtgctgttcctccacttgaaagcaaatcagatgatagttccgaagag
cgcatcaaaaatatggaaaaaagagttaatcatttagttgaagaaagttgtgtggctgca
tgtcaaggagaaatcactttagcactcgaaaaagctaaggaagccagtcgcaaagaacgt
gttcttgctagacaacgagagcaacttggtgtcgcagatcaaatcaatttagacttaacg
tattcagtactattcaatttagctaatcgttatacagcaaatggaatgtatcaagaagca
ctgaatacttatcaaaccattgttcgaaataaaatgaaagttcaagcagaaaatttcatt
aaaatggcggccaaaataattgctccagtaattgaatccaatttttctactgggtatgat
tggtgtattgatcacgtgaaaatgtcctcttatcatgaaattgcacatgatttagaaatt
gataaagctgtgatgtttttaaaacaaagagattttcatcaggcaattgatacactgaag
tcgtttgaaagaaaagatacacgtgttgcgtgtagtgctgctacaaatttatcatttcta
tactttcttgaagcgcttgttaacaaaggcaacgttttgtatcaacaacaacaatacgaa
agagctcgtgattgttacgcggaagcattgcaagatgatacacgttgtgtggaagcctta
tataatcttggtttagtatgcaaacaattagaaagatatgaagaagctctcgaagccttt
ttcaaactgtattctgttctgaggaatagtgcaccagtagtttatcagctaatggatatc
tatgagaaattgggagattctactcaagcacaggaatgggcaatgcagttacatggtatg
gttccaactgatccttttctactacaaagattaggtgatagttatgaacaggaaggagat
aaatctcaggcattttcttattattatgattcatttaaatattatccatgtaattttgac
gtaattgaatggttgggcgcatattatattgaatcacagttctgtgaaaaagctatagct
tattttgaacgcgctagtttaatgcagccaaatcaaatcaaatggcagttgatgattgct
tcatgtcaccgacgaagtggaaattatcaacaggctttagaaacataccgtattattcac
cgacgatttccagagaatattgagtgtcttcaatttcttgtacgactaagttctgatatg
gatttacctgaagctcaagattatataaccaaattgaaacgtgctgaaaaattgaaacaa
gctagagaacaacgtcgactgtcaacaagcaaccgtcgaagctttggtctaacaaatgca
tctagaacaacaggtagccgtgaaaattccgccagtgttagcagtggaggtgaaagtcgt
gaaagcagtgcaaattatgacaatcatttcagtgtccaatcaaaacatacacattctaaa
aataattcttctcgtcaaactgaagcccgtaaagaaacaggtcttagtaaagatatagac
aacgaatatattaaatataatgatccactgggaccaagtgtagaaagaccgagaacagca
gcacgtactcgatcgattcaagatgattttgcggacgaagaagttgatgaaaacctatta
ccagattaa
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