Schistosoma mansoni: Smp_137090
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Entry
Smp_137090 CDS
T01095
Name
(RefSeq) putative brca1 associated ring domain
KO
K10683
BRCA1-associated RING domain protein 1
Organism
smm
Schistosoma mansoni
Pathway
smm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Smp_137090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_137090
04121 Ubiquitin system [BR:
smm04121
]
Smp_137090
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_137090
03400 DNA repair and recombination proteins [BR:
smm03400
]
Smp_137090
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
Smp_137090
Ubiquitin system [BR:
smm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
Smp_137090
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
Smp_137090
DNA repair and recombination proteins [BR:
smm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
Smp_137090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
zf-RING_6
BRCT
Ank_5
Ank_KRIT1
zf-C3HC4
zf-RING_5
zf-RING_10
Imm70
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
8341718
NCBI-ProteinID:
XP_018651787
LinkDB
All DBs
Position
4:complement(6736171..6746795)
Genome browser
AA seq
894 aa
AA seq
DB search
MTSLVVTLGDFGSNSRKDHQMISLSQTHRAIIELLELMRCDNCTSTLHQPFTTGVCEHLL
CSSCIPSRGNVKAASCCPVCSVPVHARDFQVHPQFTSLVLVARRLKKLTMNTSQKKANDS
QNSIIENNIPDATKNEVTLPQVVVKRAYSASRQQLSEDKNPERPIGVSYKRGYSLANSDT
NISTVNTSVSNVCSTGNDSGINYKPHYSSKHSIKANKKQRLNKVTKLPAYSNSDIHQTIS
VNSVNESELCVPFDKPIESLSVEAVVVHNTRNARNKIASKVCKDKIESKQTMSSKIDVPA
PFASPEPSRLTDQSTLSPSDPISFKTSVFLTPVDLPITDENKAAASKGSNISKKNSKKIQ
NSVKKAVPVQDRKPSGFLNLLHKLRPNSKGESQLHRAAIRGDISQVEELLSAGLSPNIRD
HAGWTPLHEAALRGHCEVAKALIKAGATVDIPGGPDLETPLHEAIQNGQVDFCQLLLDHG
ANPMFPNNNGIIPIQLVDNSICQLKELHNSDSKSSKYSFLLNALSDIREMLSKASLSTIV
SDKDCLTNNKTLSILSVSSATTFIERRRLRPILLGTGLTRTQQSLFNRVATMIHARVFSS
ISPEVTHVVTGALQELSSDVVDEESVNKTKKNNKSKRNSRSLKNDNELLSSNGQATCPRT
LKFLSAVLQGCWILSFDWIETCAHIKMRVEEEGFEVTGCSTAPMSGAPRRARLAREAGSL
GLFHGLNICFLGNFVYPVPSRDELTRLARSGGASVVFSRDVCSPIRLARYAIEAANNSSI
WDLNTVEANKEFDQENNDNISFIDEITMIDSNNPSSLLVLYDPGVLSKPKNESFNKSIYA
VETVTKALSLIKPKKSTNTLSSSADDLPPPLQSIPCTWLLDCAAEYRLLPFPNC
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctctggttgtgacactgggtgattttggctctaattctaggaaagatcatcag
atgatcagtttgtctcaaactcaccgtgccatcattgaactgttggagttgatgcgatgt
gataattgcacctccaccctccaccagccattcacaactggagtatgtgaacatctgcta
tgttcttcatgtattccaagtcgaggtaatgtaaaggctgcaagttgctgtccggtgtgc
tcagttcccgtacatgcacgtgatttccaagttcatccacaatttacatcactcgtattg
gttgcacgtcgattaaagaaattaacgatgaatacttctcaaaagaaagcaaacgactct
cagaattccattattgaaaataatattcctgatgcaactaaaaatgaggttacgttacca
caagtagtagttaaaagagcctattctgcttcaagacaacaattatccgaagataaaaat
ccagaacgtccaatcggtgtaagttataaacgtggatattccttggctaatagtgataca
aatatatctactgttaatacatctgtatctaatgtttgttcaactggtaatgattcaggc
attaattacaaacctcattattcttcaaaacatagtatcaaagccaataagaagcaacga
ttaaataaagtaactaaattacctgcttattcaaactctgatattcatcaaacaatatca
gtaaattctgtgaacgaaagtgaattatgtgttccttttgataaaccaattgaatcactt
tctgtagaagctgttgttgtacataacactagaaatgctcggaataaaattgcatcgaaa
gtttgcaaagacaagatagagtctaaacaaacgatgtctagcaaaatagatgttccagcc
ccattcgcttctcctgaaccttctcgtttaacagatcagtccactttatctccgtctgat
ccgatttcatttaaaacgtctgtcttccttacacctgtcgatctaccaataactgacgaa
aataaagcagcagcttcaaaaggttcaaatatttcaaagaagaattctaagaagatccaa
aatagtgttaagaaagctgttcctgttcaggatcgtaagccatctggatttctcaattta
ctgcacaaactaagaccaaatagcaaaggtgaaagccaattacatagggcagcaattcgt
ggtgatattagtcaagtagaagagttactttctgctgggttatcaccgaatattcgagac
catgctggttggacaccattgcatgaagctgcgttacgtggacactgcgaagtcgccaaa
gctttgatcaaagctggagctactgtagatatccctggtggtccggatttagagactcct
ttgcacgaagctatacaaaatggacaagttgacttctgtcaactgttgcttgaccatggt
gctaatcctatgtttccaaataacaatggtataattccaatacagctagtggataacagt
atatgccaactaaaagaactacacaattcagattctaaatcatcaaagtatagtttcctt
cttaatgcattatctgacataagagagatgttaagtaaagcatcattatctaccattgta
tcagataaagattgtctgactaacaataaaactttaagtatcttatctgtctcttctgca
actactttcattgaaagacgacgtcttcgacctattcttttgggtactggtctaacaaga
actcaacaatcactgttcaatcgtgttgccactatgatacatgcacgtgtgttctcatca
atctcacctgaagttacacatgtcgtgactggtgcacttcaagaattgtccagcgatgta
gtcgatgaagaatcagttaataaaacaaaaaagaacaataaatctaaaagaaattctcgt
tcactcaaaaacgataatgaattactcagttccaatggccaagctacttgtccacgtact
ttgaagtttctaagcgctgttctacagggatgttggatcttgtcatttgattggattgaa
acttgtgctcatatcaagatgcgtgtagaagaagagggctttgaagtaactgggtgcagt
actgctcctatgtccggtgctcctcgtcgagcacgtctcgctcgtgaagctggttctttg
ggattatttcatggtttaaacatttgtttcctagggaatttcgtatatcctgtaccatcc
agggatgagcttactcgattagcacgttctggtggagcaagtgtagtatttagtcgtgat
gtttgctctccaattcgacttgcaagatatgctattgaggctgcaaataattcatctatt
tgggatttaaataccgtagaggcgaataaagagtttgatcaagagaataatgacaacatt
tcgtttatagatgaaatcacaatgattgattcgaacaatccttcctccttgcttgttcta
tatgatccgggtgttttgagtaaacctaaaaatgaatcatttaacaaatccatatatgct
gtagaaactgttactaaagcgcttagcttgatcaaaccgaaaaaatctacaaatacacta
agttcatcggcagatgacttaccaccacctcttcaatcgataccatgtacttggcttttg
gattgtgctgcagaatatcgtctacttccttttcccaactgttaa
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