Schistosoma mansoni: Smp_137530
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Entry
Smp_137530 CDS
T01095
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smm04131
]
Smp_137530
Membrane trafficking [BR:
smm04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
Smp_137530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
CCDC39
DUF4472
Motif
Other DBs
NCBI-GeneID:
8343067
NCBI-ProteinID:
XP_018645787
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Position
W:complement(<674929..715527)
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AA seq
978 aa
AA seq
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MSWWNSLEKAGNISKLAITALKSAQQKIDEVLDITDEATDHNALPTILEISTRQFDVTET
VSAELNESSRCESKPKKSECEVSSECADLEKSCSTRLGSHHSSLTDSLEKVIYDQSDHSS
PNDSDKVLTDENTKTDELWEVNSTLFNDCSTVTEQKASQDLCEKEYDESKITISSEYIAQ
ESVDVTSHLSFLEKELQLVNKSIPNEDITTLHRSSSDIVLPFTAQPVCADDDFDTNTTSS
DIEVISCCNSTNGGEVHDLHSSNTPTIMSPVKGPRLSSELNQNPLNLQKYSLRGFSAPVV
LNKCSSGPEHRRSVSVSQDLHMGLQNTVDDDLTFAYHDLSKKFSDVKHLLNVREAKIMQL
SHENNVLQNSVSILQEQLRTSLTTQEINSTDVSSITSEFSQRLSDTEKRLQLVCRERDQL
KKSLSSVKQKIPMITRAVGDDKPFVNNDIKRVNELENVILQKNEEIENLLKEGHKLAADQ
LKTNNLLKKLRSEQEKSKQTESSHLKQIEQLTAEVQRLRNSLENKEEILGIQLIQISKNE
IKISEQTQELETLINENSELKEQLNQIHCHSKAESQCVEDLEKAKAECETLKQKLNSNSR
DLRAFKTQHEEQAIKWREEIQYYQGLLSDAQLKIDLLNETTTTATQPIMKQLEILQSNFN
NQAFEWETKERQLNKLLAEYKLTADSAQTSEESWRSQLQITEDNLAVARLELNSLKQKYI
DLQKTFTAEEEKSQGIMFDIQELTVKLETSKSEINELHSRISELQQALLSEEQRYKTLEA
VNNNLCLQLEEMKLAKDQPLTNKVIDQPLNSHSLDRRSSLNNEVASIPKTFQLSSDMVNQ
ASMEYFQSHLHLREGECAHLKREIEQLTSTQEKLLTEVAKQTARAEKYEKLAGVKYTKHV
NRTLSQSDPFAPITNNYHDHDIGDVIDDNDPTMELQQRYETLLILCGKLTEENNELKLDL
ADVKEMYRAQIDMLLKSQ
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgagttggtggaattcattggagaaagcaggcaacatatcgaaactggcaatcacagcc
ttaaaaagtgcccagcagaaaatagatgaagtccttgatattacggatgaagctactgat
cataacgcactgccaacgatattggaaatctcaactagacaatttgacgtaacagaaaca
gtatctgctgaactaaatgaatcaagtcgttgcgaatcgaaaccgaagaaatcggagtgt
gaagtaagcagcgagtgtgcagatttggagaaatcctgttcaacaaggctgggaagtcat
cactcgtctcttacggattctctggaaaaagttatttacgatcaatcagaccattcctca
cccaatgattctgataaagtgctaactgatgagaacactaaaactgatgagctgtgggaa
gtaaattctacattatttaatgattgttctaccgtcactgaacaaaaagcatcacaggat
ttgtgtgaaaaagagtatgatgaatcaaaaataacaatttcttcggaatacattgcacaa
gaatcagtcgatgtaacttcgcacttgtcattcctagaaaaggaattgcagttagtgaat
aaatcaattccaaatgaagatataactactttgcatcgttcttcatctgacatagtacta
ccattcactgctcaaccagtatgtgccgatgacgattttgatactaataccactagttcg
gatattgaagtaatttcgtgttgtaattctacaaatggtggtgaagttcacgatttacat
tcttctaatacacctactattatgtctcctgttaaagggccgcgtttgtcatcggaactc
aatcaaaatccacttaatttgcaaaaatattctctcagaggatttagtgctccggttgtt
ttaaataaatgttctagtggtcctgaacatcgtagatctgttagtgtttcgcaggattta
catatgggtttgcaaaatactgttgatgatgatttgacatttgcctatcatgacctctct
aagaaattctccgatgtcaaacatttattaaatgttcgtgaagcaaaaattatgcaactt
agtcatgagaacaacgtactacaaaattcagtctcaatattgcaagagcaattaagaact
tcgctgaccacacaagaaatcaatagtactgatgtgtccagtatcacctcagaattttct
caacgtttatcggatacagagaaacgattacagcttgtttgtcgtgaacgagaccaattg
aaaaaaagtttatcgtcagtgaaacagaaaattccgatgataacacgtgctgtaggtgat
gataaacctttcgtaaataatgatataaaacgtgtaaatgaattagagaatgtaattttg
cagaaaaatgaggaaattgagaatttattaaaagaaggtcataaattagctgctgatcag
ttaaagacaaataatctactaaaaaaacttcgttcagaacaggaaaaaagcaagcagaca
gaatcatcacatttgaaacaaatcgaacaattaactgctgaagttcaacgactgcgaaac
agtttagaaaataaggaagagatacttggtatccaactaattcaaatcagtaagaatgaa
attaaaatatctgaacaaacacaggaactggagactctcatcaatgaaaattcagagttg
aaagaacagttgaatcaaattcactgtcattcaaaagctgaaagtcaatgtgtcgaagat
ttagaaaaagcgaaggctgaatgcgaaaccttaaaacagaaattgaacagcaattcaaga
gatttacgtgcatttaaaacacaacatgaagaacaagcaattaaatggagagaagaaatt
cagtattatcagggtttattgtcggatgctcaattgaaaattgatctattgaatgaaaca
actaccactgcaacgcaaccaatcatgaaacaattagaaattcttcaatctaatttcaat
aatcaagcatttgaatgggaaacaaaggaaagacaactgaacaaattattagctgaatat
aaacttacagccgatagtgctcaaacgtctgaagaatcatggcgaagtcagcttcaaata
acagaggataatttagcagtagctagattagaattgaattctttaaagcagaaatacatt
gatttgcagaaaacatttacggcagaggaagagaaatcacagggtatcatgttcgatata
caagaattaactgtcaaactggaaacatctaaatctgaaattaatgaacttcattctcgt
ataagcgaattacaacaagcattattatctgaagagcaacgttataaaacattagaagcg
gtaaataataatttatgcttacaactagaagaaatgaagttggcaaaagaccaacctttg
acaaataaggtcatcgatcaaccattgaattcacattcccttgaccgaagatcttcatta
aacaatgaagtagccagtattccgaaaacatttcaactttcttctgatatggtcaatcaa
gcttctatggaatattttcaatctcatctacatttacgcgaaggtgaatgtgctcatttg
aaacgtgaaattgaacaattaacatctacacaagaaaaattattaactgaagttgctaaa
caaacggctcgagctgagaaatatgaaaagctagcaggtgtaaaatatacaaaacatgta
aatagaaccttatcacagtcagatccctttgctcctattacaaataattaccatgatcat
gatattggtgacgtaattgatgacaatgatcctacaatggaattacaacaacgttatgaa
actttattgattttatgcggtaaattaacggaagaaaataatgaacttaaattggattta
gctgatgttaaagaaatgtatagagctcagattgatatgcttctaaaaagtcaatag
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