Schistosoma mansoni: Smp_139940
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Entry
Smp_139940 CDS
T01095
Name
(RefSeq) putative pou6f1/brn-5
KO
K09368
POU domain transcription factor, class 6
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smm03000
]
Smp_139940
Transcription factors [BR:
smm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
Smp_139940
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
HTH_31
Motif
Other DBs
NCBI-GeneID:
8348673
NCBI-ProteinID:
XP_018654212
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Position
W:complement(15173779..15184412)
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AA seq
380 aa
AA seq
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MTDNDITEEHSFGSCLQPLALTAGNTIFSSKTIKHRTPSFPVTSNYCPSLNSLAEPFLNL
GPKLIQTEEYDQSNKSLSYKTFYENWLRYFYLLVQQNNLHNSIDSVEELQKQIQIYNNKC
KVFVTASNSNKETACNNNNNNDLPNTHFRENTRDDLLTDQIAYDSDSECESLLSNSNQDL
VDSKTASNGQTDNPSLRTSSKSQRLKTMIQEKEDRISLNDDLAEIYEFAHLFKLRRLSLG
LTQTQVGASLNAKEGPAYSQSAICRFEKLDVTLKSAKRMKPVLERWLSETQAMHHNGANE
SFGAQLVHRPPRKRKRRTCFSTKALKCLLHQLERNPYPTKAEMTELAKALTYDREVIRVW
FCNRRQAIKTTEKQTTSVHL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaacgatattactgaagaacattcatttggatcttgcttgcaaccgttagca
ttaactgctgggaatacaatattttcatcaaagacaatcaaacatagaacaccttccttt
ccagtcacatcaaattactgtccatcgctgaactcattagctgagccatttctaaactta
ggtccgaaattaattcaaactgaagaatatgaccaatccaataaatcattatcatataaa
acgttttatgagaattggttacgctacttttatcttttagtccaacagaataatttacac
aatagtatagattcagttgaagaacttcaaaaacaaattcagatttataataataaatgc
aaagtgtttgtgacagcgagtaactcaaataaggaaactgcctgtaataacaataacaat
aatgatttaccaaatacgcactttcgagaaaatacaagggatgatttattaacagatcaa
atagcatacgattcagatagtgaatgtgaatccctgctatcaaattcaaaccaagactta
gtcgattcaaagactgcttcaaatggtcaaacagataatccgtctttacgcacttcatca
aaatcacaaagattgaaaactatgatacaagagaaggaagatagaatttcacttaatgat
gatcttgcggaaatatatgaatttgcacacttgtttaaattacgtagactcagtttgggt
ttgacccagacacaagttggagcttctctaaatgccaaagaaggacctgcttatagtcaa
agtgcaatctgtcgattcgagaaacttgatgtaactttaaaatctgcaaaacgaatgaaa
cctgtcttagaacgttggttatctgaaacccaggcaatgcatcacaatggagcaaatgaa
tcctttggagctcaactcgtacaccgaccacctaggaagcgtaaacgtagaacctgtttc
agtactaaagcactaaagtgtttattgcaccaacttgagaggaatccttacccaacaaaa
gctgaaatgaccgagttagccaaagccttaacttatgatcgtgaagttattcgtgtatgg
ttttgtaataggcgccaagccattaaaaccactgaaaagcaaacaacatctgttcacctt
taa
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