Schistosoma mansoni: Smp_140990
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Entry
Smp_140990 CDS
T01095
Name
(RefSeq) hypothetical protein
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_140990
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
Smp_140990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WH_Egal
HTH_11
SYF2
Motif
Other DBs
NCBI-GeneID:
8344472
NCBI-ProteinID:
XP_018645154
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All DBs
Position
1
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AA seq
1030 aa
AA seq
DB search
MNDPSHKAMLYFLEVLMNSDSPITVDQLAERFSHKSFSVEMRDACGGGSADGLREFLQRY
PSLFNVKPNGQVTSVTIELPGLDSNFGGSSDQESCSIKESGHKSINENLSDSSSSLQNFP
YNFDSNYSSKTCPISCVQKEYAYSRFQSGRKPNPSNTNTNSNINHNSINNNNRLNSTSCL
SLVSDQSISSSNGSSNFVKNSSDHSLGPKPSNVYQPPQLRNLEHGTSSVLSSSCELCSSS
SNVPTTINSSGCNALLSNHHEFSTMTNGTCIHCPLIELTCHHHTHHCTTAHHHSSSAHCH
CTTSPLTANPSAPFFHHIHDPIHKISTAQNTLRSPSILLPNYYNLPVMEKFILESEAVHF
FQQKLIKREERWIPIKSLAGHLSQASPEVRAIVGPQLEFRRFLLKHPHVFEVQGDLVSVK
DPFTSVFGLKRSHDRLSAIHSSHSSSNLYNATQTYLPRNKPYERNPRPKSLVLPNMVNFG
HLSNVSDGIGGYYTPSSSSSIQRSTAGSRHRRSAHFLNDNSTKSPQNKTLTESESISSVP
ATPINSNLVSGISSPANDTSSLTNSLPSVTSNTMNSISLTMSANEYRAIMFLRKVLEKHG
GSAGQSGLSLQDVMQFLSNKASETVQTTIGWTKIELEEFLSQHNLFFELKSIKASFDNGT
NDTDCSQVKQCQQQKHQQLSNSNIDYINVCNKRLNRMINIIITASKPIDFNGVRTLTNRC
GRIFHVAKLWGIIDLGKHEHVFFDKSIFRHVDEILYFNAVLAPKESRAKWRATHVWKECD
RENVEKFGALSHMKKLNSLNNSHNKTLLHNIQNFYESDIGQRNGHNKSRSREVAISTMDH
EGNVGTTETTISTAADDDTEVEEEIEDFIVETCTNNKERELVKSNQNHLVDNDSDLEYAL
AGDEEIEDDGEEPFVSPIAHEEGLHLPIDIKFIPGELEEEMQRVLNFQSKHNHNKTGIHL
LSNSKSSCLELYDSSHSTELCNQTQSEPCYIKKDSGTSSSLSEMSGVSIAVQTVSTGDIM
TTQLYHDNKA
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatccaagtcataaagcaatgctttattttcttgaggttcttatgaattctgat
agtccaatcactgttgatcaattagcagaacgtttttcacacaaatcattcagtgtagaa
atgcgtgatgcatgcggtggtggaagcgctgatggtttacgtgaattcttacaacgttat
ccttcattgttcaatgtaaaaccgaatggacaagtgacatcagtcactatcgaactacct
ggcttagattcaaatttcggtggttcatccgatcaagaaagttgttcaataaaagaaagt
ggtcataaatcaataaatgaaaatttgtccgacagttcttcttcattacaaaatttccct
tacaatttcgactcaaattactcatctaaaacatgtccaatatcatgtgtgcaaaaagaa
tatgcatatagtcgatttcagtctggtcggaaaccgaatccttccaacaccaatactaat
agtaatattaatcataatagcattaataacaataatcgattgaatagtacaagttgttta
tcattagtgtctgatcagtcgattagttcatccaatggatcgtcaaactttgtaaaaaat
tcatctgatcattcattaggaccaaaaccttcaaatgtttaccaaccaccacagttacgt
aatcttgaacatggaacctcatcagtgttatcatccagttgtgaattatgctcttcttca
tcaaatgtccctactacaattaatagtagtggttgtaatgctttactaagtaatcatcat
gaattctctacgatgactaatggaacatgtatacattgtccattgatagaattaacctgt
caccatcatacacatcactgtacaactgcacatcatcattcatcttcagcgcattgtcat
tgtacaacctctccactgacagcgaatccatcagctccattctttcaccatatacatgac
cctattcataaaatatcaacagcacaaaatacattacgatctccatctatactactacca
aactactacaatttaccagtaatggagaaattcatacttgaaagtgaagcagtacacttt
tttcaacagaaattgattaaacgagaagaacgttggataccaattaaaagtttagcagga
catttatcgcaggctagtccagaagttcgtgctatagttggtccacaattggaatttcga
cgttttcttttgaaacatccacatgttttcgaagtgcagggagatttagttagtgtaaaa
gatccattcactagtgtttttgggttgaaaaggtctcacgatcgtttatcagctattcac
tcaagtcattcgtcctcaaatctatataatgctacacaaacttatctaccacgtaataaa
ccatatgagagaaaccctcggcccaaatcacttgttttaccgaatatggtaaattttgga
catttatcaaatgtatccgacggtattggtggttattatacaccatcatcatcatcgtcg
attcaacgatcgactgctggaagccgtcatcgccgttcagcacattttctaaatgataat
tcaacaaaatctcctcagaataaaacattaactgagtcagagagtattagttcagtgccg
gcaacacctatcaattcgaatcttgtatcaggcatcagtagcccagcaaatgatacatct
tcactaactaattcattacctagtgttacatcaaacacaatgaatagtattagtttaact
atgtctgctaatgaatatcgggcgataatgtttttacgcaaagtattagaaaaacatggt
ggttcagctggtcaatctggtttaagtctacaagatgtgatgcagtttttatctaataaa
gcatctgaaactgttcaaacaacaattggttggactaaaattgaattagaagaattttta
agtcaacataatctattttttgaattaaaatcaattaaagcatcatttgataatggaaca
aatgacactgattgttcacaagtgaaacaatgtcaacaacaaaaacatcaacaattatct
aattcaaatatagattatattaatgtatgtaataaacgtttaaatcgtatgatcaatatt
attattactgcatcaaaaccaattgatttcaatggagtacgtacattgacaaatcgttgt
ggtagaatatttcatgtagctaaattatggggaattattgatttaggtaaacatgaacat
gtattttttgataaatcaatatttcgtcatgttgatgaaattttatatttcaatgctgta
cttgcaccgaaagaatcacgtgcaaaatggcgtgcaactcatgtttggaaagaatgtgat
cgtgaaaatgttgaaaaatttggagcattatctcatatgaaaaaattaaattcattaaac
aatagtcataacaaaacactgttacataatatacaaaacttttatgaatctgatataggt
caacgaaatggacataacaaatcaagatcacgtgaagttgctatcagtactatggatcat
gaaggaaatgttggtactaccgaaactacaatttctactgctgctgatgatgatactgaa
gttgaagaagaaattgaagatttcatcgttgaaacgtgtacaaataataaagaaagagag
ttggttaaatcaaatcaaaatcatctagtggataacgattccgacttagaatatgcttta
gctggtgatgaagagattgaggacgatggggaggaaccatttgtttcaccgatagcacat
gaagaaggtttacatttaccaattgatataaaatttataccaggtgaactagaagaagaa
atgcaacgtgtgcttaattttcagtcaaagcacaatcataataaaactggcatccatcta
ttatcaaactctaaatcatcatgccttgaattatacgattcaagtcactcaacagaatta
tgtaatcaaacacaatcagaaccatgttatataaaaaaagatagtggaacatcgagttcg
ctatctgaaatgagtggtgtatctatagcagttcaaactgtctcaacaggtgatattatg
acaactcagttatatcacgataataaagcataa
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