Schistosoma mansoni: Smp_142090
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Entry
Smp_142090 CDS
T01095
Name
(RefSeq) hypothetical protein
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
smm
Schistosoma mansoni
Pathway
smm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
Smp_142090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smm04121
]
Smp_142090
03400 DNA repair and recombination proteins [BR:
smm03400
]
Smp_142090
Ubiquitin system [BR:
smm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
Smp_142090
DNA repair and recombination proteins [BR:
smm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
Smp_142090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
Motif
Other DBs
NCBI-GeneID:
8349607
NCBI-ProteinID:
XP_018645122
LinkDB
All DBs
Position
1
Genome browser
AA seq
906 aa
AA seq
DB search
MCSIDMQTWDSERRNLHKNTCCETFIMYCHRCPACHKQIAGRTSRTHLKRCASKLNMDLF
SLMSLSCRDHRFIRRENEDLHTACALSLSIDEEMKQRKSEAILATKIDPIDLDSPSHLLL
SSEQRERILAEKLESILLEECKQLSPRQSNKPEDKCSTSELSSVSPDTLSKCSSYLTNIN
SNPLLSMIGNSLCSDLCLILDEGDIIPAHKFIFAAWNLNINYSQCDIIEVRNVSKDELIN
LLQILYSGDRSKLTIEYIDHASEALQNIIRNWGLNSVKSELDIVKPEDCSLTHSIDLSTD
YKMENINYNDYSYSNPSIISIQTSTASNQAAQINIDNPIQSSLQVTCFDPITTTDKSDTN
SVSSFVDSTILPVEKLNHEQQYQIVTTQSSSLSPFISVNTPIIQSKLYTPNPAQFSRDLF
LFSDNDDSINENVDHIVMEINHHSNQVETLQSVDDGNLNGGTLETITKLTTESETTDNNS
PILLLNDSPTSTKLSSVSNNNGVQATTPKHLYNSWLEDETTPSPLMKRIRLSNNDEIVSN
PLLHVTTITTDVKNSSTVNTIPSVCHTEKSILTDSVLDFLTTNSFNNHNSKDDNCNNKPQ
EINESLLIKPTNRENCQETFASDQLLTPDKNSSNFMPGSVNTTPVPFTPLPKYEEMMTPE
LKRALSKYGVKPLPRKRAVLLLKEIYNQLHQYEEDEQNEFMPDKPIGSVKHNNNRRLQEN
CIGKEKKCSSKLDRSKKMPLNVPTNVHNLSLLPISCKNATDDDGRGDSFVQQESLLSTII
PTISSSAPSNEVISSDKLSHSNSQDLDKLSQKQVNKDKGNINQTVLHYLKNNPNLYMNIL
TYTPLEFDVIHSMLKSDGIIIGQQKLMDLLDDQCITFTLRNRVKNHNKGNSSLSKKSIRS
IKNIVQ
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagcatagatatgcaaacatgggattcagaacgaagaaatcttcataaaaatact
tgttgtgaaacatttatcatgtattgtcatcggtgtcctgcatgtcacaaacagattgct
ggtcgaacatctcgaacacatttaaaacggtgtgcctccaagttaaacatggatttattt
agtctcatgtcattatcatgtcgagatcatcgtttcatcaggcgtgaaaatgaagactta
catacagcttgtgcattatctttatccatagatgaagaaatgaagcaaagaaaatctgaa
gcgattctagctacaaaaattgatcccatcgatttagattcaccgtctcatttactttta
tcaagtgaacaacgtgaaagaatattagctgaaaagttggaatccattcttcttgaggag
tgtaaacaattatctccaagacaatctaataaacctgaagataagtgtagcacatcagag
ttatcatcagtgtctcccgataccctttccaagtgttcatcatatctgactaatattaat
tctaatccattactatcaatgattggaaatagtttatgttcggatttatgtttaattttg
gatgaaggtgatataattccagcgcataaatttatatttgcagcttggaatttaaatatc
aattattcacagtgtgatatcattgaagttcgtaatgtatccaaagatgaacttattaat
cttttgcaaatattatacagtggagatcgttcaaaacttacaattgaatatattgatcat
gcatcagaagcattacaaaacataatcagaaactggggtctgaatagtgtaaaatctgaa
cttgacattgttaaaccggaagattgttccctaacacattcaattgatttatcgacagat
tacaaaatggaaaatataaattataatgattattcctattctaatccttctattatctca
atacaaacatcaacagcttcaaatcaggcagcacaaatcaatattgataatcctattcaa
tcttcactacaagtaacttgttttgatcctattacaactactgataaatctgatacaaat
tctgtatctagctttgttgattccactattctcccagtcgaaaagttaaatcatgaacaa
caatatcaaatagttacaactcaatcatcatcattatcaccattcatatcagttaatact
cctattattcagtcaaagttgtacactcctaatccagctcaatttagtcgtgatttattt
ttattctctgataatgatgatagcattaatgagaatgttgatcatattgttatggaaatt
aatcatcattctaatcaagtagaaactctacaatctgttgatgatggtaaccttaatggt
ggtacattggaaacgattactaaacttacaacagaatcagaaacaacggataataattca
ccaatcctccttttaaacgactcccctactagtacaaaattatcttcagtctcaaataat
aatggtgtacaagctactactccaaagcatttgtataattcttggttggaagatgaaaca
actccatcacctttgatgaaacgtatacgcttatcaaataatgatgaaatagtttcgaat
ccattattgcatgtaactactattactactgacgttaaaaatagtagtacagttaatact
attccatctgtctgtcatacagaaaaatctattctaactgattcagtacttgatttttta
accacaaattcattcaataatcacaatagcaaagacgataattgtaataataagccacag
gaaatcaatgagagtctgcttattaaacctactaacagagaaaattgtcaagaaacattt
gcttcggaccaattattgacaccagataaaaattcatcaaattttatgcctggatcggtc
aacactacaccggtcccttttaccccattacctaaatatgaggaaatgatgactccggaa
ttgaaacgtgctttatctaaatatggtgtgaaacctcttccacgtaaacgtgctgtacta
ctcttaaaagaaatctataatcaacttcatcaatatgaagaagatgaacagaatgaattc
atgcctgacaaaccaattggatcagtgaagcacaataacaatagacgactacaagaaaac
tgtataggtaaagaaaagaaatgtagtagtaaattagacagatctaaaaagatgccgtta
aatgttccaactaatgtacataatttatcattattacctatcagttgtaaaaatgctact
gatgatgatggtagaggtgatagttttgtccaacaagaatctttgttatcaacaataata
ccgactatatcatcttcagctccttctaatgaagttatttcgtctgataaactctctcat
tcaaatagtcaagatttggataaactaagtcaaaaacaagtcaataaggacaagggtaat
ataaatcaaactgtattacattatttgaagaataatcccaacttatatatgaatatttta
acttatacgccattagaattcgatgttatacatagtatgcttaaatcggatggtatcatc
attggacaacaaaagctaatggatcttttggatgatcagtgtattacattcacactacgc
aatcgtgttaaaaaccacaacaaaggcaatagttcattgtctaagaaatcaattaggtct
atcaaaaatattgtacaataa
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