Schistosoma mansoni: Smp_142920
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Entry
Smp_142920 CDS
T01095
Name
(RefSeq) putative coatomer alpha subunit
KO
K05236
coatomer subunit alpha
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smm04131
]
Smp_142920
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smm04147
]
Smp_142920
Membrane trafficking [BR:
smm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
Smp_142920
Exosome [BR:
smm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Smp_142920
Exosomal proteins of bladder cancer cells
Smp_142920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
Motif
Other DBs
NCBI-GeneID:
8351967
NCBI-ProteinID:
XP_018653768
LinkDB
All DBs
Position
W:2126382..2138904
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AA seq
550 aa
AA seq
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MTYQRVKNFDKLTFLYLITGNLEEIKKNDENCHYHIALLLGDVAERVKLLRNCGQKPLAY
LTSATHGLQQETKELEEQLTALSLQSVPGDSNVSFVPEIDSNASLIMPSPPILRADKITD
GKPSETDWPLLSIQLDFFETAIAQRRNAALNLLLDTEDVPEGAWGKDANLELDEPNELED
ELDIGGDTVNTNETGDKNPEDGGWDINDADLELPSDLQNSSTVLTNKNENAYVAPSPGRP
NSYLWSENSNLPADQIMAGNWMNAMRLLSAQVGVVNFEPYKTIFMNLFSASRIMCMALPL
VPSQFAYPQRNWKKVSSTSALPAPVISLNDLITRLQTAYQLTTKGKFQDAINRFRMILLS
IPLLVVDSPSEESEARSLINICREYIVGLSMEMTRKSMPKDTIAEQIRNAELACYFTHCR
LETPHLILTLRTALNLLYKLKNYRSAATMARRLLDLAPSIEVAQQTRKILQACESVTPNE
DSHTLSYDPLNPFDICAATYTPIYRGKDSVRDPLSGAYYVPTMKGQLCRVTGVTEIGIEH
QGLVIRSNRS
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgacttatcaacgagttaaaaattttgataaactcacattcctatatttgattactgga
aatttggaagaaattaaaaaaaatgatgaaaattgtcattatcatattgcattacttttg
ggtgatgttgctgaacgtgtaaaactactacgtaattgtggacagaaaccacttgcctat
cttacctctgctacacacggtcttcaacaggaaactaaagagttggaggagcagctcact
gcattatcgttacaatctgtaccaggtgattcaaatgtttcttttgtaccggaaatcgat
tcaaatgccagcttaataatgccatcaccgcctattcttcgagctgataaaattactgat
ggaaaaccttcagaaactgattggcctcttctaagtatacaattagatttctttgaaaca
gcaatagctcaacgtcgaaatgctgcattaaatttacttttagatacagaagatgtacct
gaaggcgcttggggaaaagatgcaaatcttgaacttgatgaaccaaatgaactcgaagat
gaattagatattggtggtgatacagtaaatacaaatgaaactggtgataaaaatccagag
gatggtggttgggatattaatgatgctgatttagagttaccatctgatcttcaaaattcc
agtacagttttaacaaataaaaatgagaatgcatacgttgctccatcacctggtcgacct
aatagttatttgtggagtgaaaattctaatttaccagctgaccaaattatggctggaaat
tggatgaatgcaatgcgtctactcagtgctcaggttggagtggtcaactttgaaccgtat
aaaacaatttttatgaatttgttcagtgcatctcgtataatgtgtatggctttaccattg
gtaccatcacagtttgcatatcctcaacgcaactggaaaaaggtttcatcgacatctgct
ttaccagctcctgtaataagtttaaatgatttaataactcgtctacaaacagcatatcaa
ttaacaactaaagggaaatttcaagatgctatcaatcgttttcgaatgattttattatct
attccattattggtagttgattcaccatcggaagaatcagaagctcgtagtttaatcaat
atttgtagagaatatattgtgggtttatccatggaaatgacacgtaaatctatgccaaag
gatacaatagctgaacagattcgtaatgctgaattagcatgttattttacacattgtcgt
ttggaaacaccacatcttatattaactcttagaacagcattgaatttattgtataaactg
aaaaattatcgatccgctgcaactatggcaagacgtttattagatttggcaccatccata
gaagttgctcaacaaacacgtaaaattctacaagcatgtgaatcagtaacaccaaatgaa
gattcgcatacattaagttatgatcctttaaatcctttcgatatatgcgctgctacttat
actcctatctatcgtggtaaggattccgtacgtgatcctctaagtggagcatactatgta
ccaacgatgaagggtcaactatgccgtgtaactggggttacagaaataggtattgaacac
caagggttagtaattcgatcaaatcgttcttaa
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