Schistosoma mansoni: Smp_144170
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Entry
Smp_144170 CDS
T01095
Name
(RefSeq) RAR-like nuclear receptor
KO
K08532
RAR-related orphan receptor alpha
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smm03000
]
Smp_144170
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
smm03310
]
Smp_144170
Transcription factors [BR:
smm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
Smp_144170
Nuclear receptors [BR:
smm03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
Smp_144170
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Rhodanese
Motif
Other DBs
NCBI-GeneID:
8347544
NCBI-ProteinID:
XP_018649430
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Position
1:60803165..60815688
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AA seq
640 aa
AA seq
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MSHCPVEYSNPNSQNTISYITSDSVISVSFADCQSSSPSYHSLSSSTALPGVGSFLDKSN
HLPHYSPNKYYDTEPTAIPGHSYVENTDVFDNNLPYPIKSEAIHETVSGTFITPDAHNES
CFTSPLQPLKSLNPSLPVQSSESLLSGFTHPLSMDHTVLEDGGLDLDRVFVAIINDRNSE
HDIFNDNDVNCDSERCKKQLLNNSIQSSVNQSMLTDDSEDKSLLQYYSVIDSEKTTQHQT
HPKTSPISEVEQTHKSSGSSEVSTRMCVVCGDKASGFHYGVSTCEGCKGFFRRAIQRDQS
YTCAKNGTCEINKTLRNKCQQCRLLKCIAVGMSRDAVRKRRQGKKREQSSCESVTLPSSD
SSNKYEGSAYSSCSADVVLTPSKAHLNETTPDPHEMPIKSINFQPSSSIPSSTNISLTLC
NNNNNSNNSNNLTKEDQQTLDKFDRFLNYCKDQAIKYQANNWNISKSDYYHLSGSLSRHL
SPIKHTPHELGESLKLLTVDEIFCPAQLKFTHEFACHLEQFIRLSQHDQAILLRDCLPEL
AILMLCRENRNKTHMNSSSTSINYQLNCLFSPWFPNAVVTDSSLDCLHMTCDSITAQSIF
QFASRLQRLHLTNMEFGPLIGVILFTPGHICLQIVEDYKY
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgagccattgtcctgtagaatattcaaatcctaattcccagaatactatatcttatatt
acctcagattctgtgattagtgtctcattcgcagattgtcagtcgtctagtccttcatac
cactctctgtcatcaagtacagcccttcctggtgttggctctttcttagataaatcaaat
caccttccccactattctcctaataaatattatgatacagaacctactgcaattccggga
cactcttatgttgaaaacactgacgttttcgacaacaatcttccttatccaataaaatcg
gaggccattcatgaaacagtatctgggacgtttattactccagatgcacacaacgaatca
tgttttacatctcctttacaacctctaaaatcattaaacccaagtcttcctgtccaatct
agtgaatctttgttaagtggtttcactcatccactttctatggaccataccgttttagaa
gacggtggattagatttggatcgagtgtttgtcgctattattaatgatcgaaattctgaa
catgatatctttaatgacaatgatgttaattgtgatagtgaacgctgcaaaaaacagtta
cttaataatagtattcagtcatccgttaatcaaagtatgctgacagatgattcagaggac
aaaagtttattacagtactattctgtaatagattctgagaagacaactcaacatcaaacc
catccaaaaacatcccccatttcagaagttgaacaaacacacaaatcatctggatcatct
gaagtttcaacccgaatgtgcgtagtttgtggtgacaaagcttcaggattccattacggt
gtctctacatgcgagggttgtaagggtttcttccggcgtgctatacaacgtgaccaatca
tatacttgtgctaaaaatggtacatgcgagataaataaaacgcttcgtaataaatgtcaa
caatgtcgactcctcaagtgtattgctgtgggaatgtcgagagacgctgttcgtaaaaga
cgtcaaggcaaaaaacgggaacagtcttcttgtgaatcagttaccttgcctagttcagat
tcctcaaacaaatatgaaggatcagcatactcatcatgttctgcagatgtagttttgact
ccatctaaagcacatctaaatgaaactacacctgatcctcatgaaatgccaataaaatca
attaattttcaaccatcatcttcaataccatcttctactaatatttctttaaccttatgt
aataataataataatagcaataatagtaacaatttgactaaagaagatcaacaaactcta
gacaaatttgatcgttttttaaactattgtaaagatcaagcgatcaaatatcaggcaaat
aattggaatatttctaaatctgattactaccacttatcaggatctttatcaagacattta
tctcccataaagcatactccccatgaattgggtgaatcattaaaacttcttacagtagat
gaaatattttgtcctgctcaacttaaatttacacatgaattcgcctgtcatttagaacag
ttcatacgactttctcagcatgatcaagctatcctattaagagattgtttgcctgaactt
gctatattaatgttgtgtcgcgaaaatcggaacaagactcatatgaactcttcatctaca
tcaataaattatcagttgaattgtttatttagtccatggtttccgaatgcagtagttaca
gattcctctttggattgtctacatatgacttgtgatagtataactgctcaaagtattttt
caatttgcttcaagacttcaacgattgcatttgacaaacatggaatttggaccacttatt
ggtgtgatactttttactccaggacacatctgtttacaaatagttgaagattataaatat
taa
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