Schistosoma mansoni: Smp_147860
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Entry
Smp_147860 CDS
T01095
Name
(RefSeq) putative transient receptor potential channel
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smm04040
]
Smp_147860
Ion channels [BR:
smm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
Smp_147860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_3
Ank
Ank_4
YVC1_C
PKD_channel
Motif
Other DBs
NCBI-GeneID:
8345832
NCBI-ProteinID:
XP_018649047
LinkDB
All DBs
Position
1:48302018..48363973
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AA seq
717 aa
AA seq
DB search
MAHIDNKKVDFVQRENESDCRTFRTGSIGEKEQHTSRFRRLTSGSLRHKSSCSQVPSIKT
DFIEPVHNMDPLHTYFNSDTEVSDSGVPRINDNSYINNTRRPKRYRRSCRSPYETPNYST
ALGPLREKHKLSPLERIFLEAAERGDKSTLIRCLSFSNGVNVNCVNMLGRTAIQIAVDNE
NIELVELLLEQPGIEIGDAILYAIQEGVYRIVEMLIDHPSITKEMLGTSWTTQCIGIGKR
EEESHDFSADISPVMLAAICNQFEILQLLINRGARIEEPHKSSCSCEHCHRLLTDDPLKH
TLQRINTYKALASPAWISLTSPDPILTAFELSSELLHLASRENEFKETFLSLCEQCRKYA
CDLLDLCRGTGEVVAVLSKGTDSDESLSDVSNRLKLAIKHEQKKFVAHPHCQHLLTTLWY
DQLPGWRKRHPFTKLFLCFCFIIALPILAPTYLIHPHGCVGQLMRSPLIKFINHSASFAI
FIFLLLIASTDTLTKTDLQRRSEIRGPDPNVIEMLILWWVIGFVWSEMKQIWEEGLKAYV
RQWWNWLDFLMLGLYLTTVALRVVAVILRKTNQYGTEPLPRNQWPETDPTLLSEALFSIA
HIFSFARIIFLFQTCQFISYIILALIWKQSIGKFVTFVNKTSGERERMESARNTMVVGEI
LLLIYHAMAIIVLVNMLIAMMSNSFQTIQNHADTEWKFARSKLWAVILMKDQRFHHR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcacatattgacaataaaaaagtagactttgttcaacgagaaaatgaatcggattgt
cgaacatttagaactggatctattggagaaaaagaacaacatacaagtcgatttcgacgt
ttaacgtctggtagtcttcgtcataaaagtagttgtagtcaagtaccatcaataaaaact
gattttattgaacctgtacataatatggatccattacatacgtatttcaattctgatact
gaagtaagtgattcaggtgtacctcgaataaatgataattcttatatcaataatacacgc
agacctaaaagatacagacgttcatgtcgttctccttatgaaacacctaattattctact
gctttaggaccattaagagaaaaacataaacttagtccattggaacgtatatttttagaa
gcagcagaacgaggtgataaatctactctgatcagatgtctatcattttcaaatggtgta
aatgttaattgtgtcaacatgttgggtcgtacagcaattcaaattgcagttgataatgaa
aacattgaattagttgaattacttcttgaacaacctggtatagaaattggtgatgcaata
ttgtatgctattcaagaaggcgtttatcgaatagttgaaatgttaattgatcatccatca
atcactaaagaaatgttaggtacatcatggacaacacagtgtattggaatcggtaaacga
gaagaagagagtcatgacttttctgctgatatttctccagttatgctggctgcaatctgt
aatcaatttgaaattttacaattacttataaatcgtggtgccagaatagaagaaccacat
aaatcatcgtgttcctgtgaacattgtcatcgactacttacagatgatccactgaagcac
acacttcaaagaataaatacatataaagcacttgctagtccagcatggatatcgttgaca
tctcctgaccctatactaactgcattcgaattatcttcagagcttcttcacttagcatca
cgtgaaaatgagtttaaagaaacattcttatcattatgcgaacaatgtaggaaatatgct
tgtgatttattagatctatgcaggggaacaggtgaagttgttgctgtactcagtaaaggg
actgatagcgatgaaagtttaagtgatgttagcaatcgtttgaaattagccattaaacat
gaacagaaaaaattcgttgctcatccacattgtcaacatcttttaaccaccttatggtat
gatcaattacctggttggcgtaaacgtcatccatttacaaaattatttctttgcttttgt
ttcataattgcattgccaatattagcgccgacatatttaattcatccacatggatgtgtt
ggccagttgatgcgaagtccattaataaaattcattaatcatagcgcatcatttgcaatt
tttatattcttacttttgattgcatcaactgatacattaacgaaaacagatttacaaaga
cgtagtgaaattcgtggaccagatccaaatgttattgaaatgttaatattatggtgggtt
attggatttgtatggagtgaaatgaaacaaatatgggaagaaggtcttaaagcttatgtt
cgtcaatggtggaattggttagatttcttgatgcttggactttatttgactactgttgca
cttcgtgttgttgcagtcatattacgcaaaactaatcaatatggaacagaaccattacca
cgtaatcagtggcctgaaacagatccaacattacttagtgaagcactgttttctattgca
catatatttagttttgcaagaattatatttctatttcaaacttgtcagttcatatcgtac
attattttggcacttatttggaagcagtcaatcgggaaatttgtgacatttgtaaataaa
accagcggtgaacgtgaacgtatggaatcagctagaaatacaatggttgtcggtgaaatc
ctactattaatttatcatgcaatggcaattatagttttagtaaatatgttaattgctatg
atgtccaattcatttcaaactatacagaatcatgcagatacagaatggaaatttgctcga
agtaaactatgggcggttattttgatgaaggatcaacgcttccaccaccgctaa
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