Schistosoma mansoni: Smp_148930
Help
Entry
Smp_148930 CDS
T01095
Name
(RefSeq) structure specific recognition protein,putative
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smm03000
]
Smp_148930
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_148930
Transcription factors [BR:
smm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
Smp_148930
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
Smp_148930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
Rttp106-like_middle
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
BUD22
Nop14
Motif
Other DBs
NCBI-GeneID:
8353260
NCBI-ProteinID:
XP_018645661
LinkDB
All DBs
Position
4
Genome browser
AA seq
632 aa
AA seq
DB search
MADIAFDHITQEVRGTVYPGKLRLKEDEFMYKNEKTGKVDHFSRSDIESAQWIVRATGLG
LSIKLRNNSLHRYDGFGEIEAEKVGSFFKKYFDVEIVKRELCYKGYNWGDVDFDGDVLEF
SVKNAMAFEVPLSNVANAVLNKNEIIFEFHLNDEAEICLSEMRLYTPGTEADREGKAPAI
YSKVTQKADIIQVTGDFLAEFKQLQCLQPRGRYDVKLYPSFIHLHGKSYDFKVPKNTITR
LMVLPHPDNRQIFFAVQLDPPIKHGQTRYHFVVSLFDKDSHINLEMAATEDWLQEQFNGK
LTRNISGPEYEVVARVFKVLYDQKVTVPGSFSAKGGGCAVACSYKASVGLLYPLERGFTF
VPRPPISIRFDEIVAVQFSRGTGAQRSFDFEVETRNGLTHTFTSIERDEYHHLYDFVTAK
KLRVKNISSENKTTNPGDDVWSSSDESHDAYMEKVKTEARERTTEMDDDDDDDEDDEDFK
PPESDGSELAEEYDSNVQTTTSEDESGENDDDDDSEEDETNISNETKQPSKRQTKKQKKP
KDPNAPTRPLSAYFLWFNENREKIAKNLGGQNSVAEVAKAAGEIWRNMDSTAKSSYQSRV
DELKKKYQEDLRIYQSNLGSNKEPDLSSDSSS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcagatatagccttcgaccatataactcaggaggttagaggtactgtatatccgggt
aagcttcgactcaaagaagatgagtttatgtataaaaatgaaaagactggaaaggtggat
cacttctcccggtcagatatagagtcagctcaatggatagtccgtgcgactggtttagga
ttaagcataaagttaagaaataactctttgcatcggtatgatggctttggtgaaatcgaa
gcagaaaaggttgggagcttttttaaaaagtatttcgacgtcgaaattgtgaagcgtgag
ctgtgctacaaaggctacaattggggagacgtggatttcgatggcgatgttctcgagttt
tcagttaaaaacgctatggcttttgaggttcctctaagcaatgttgcaaatgctgttttg
aacaaaaacgagattatttttgaatttcacctgaatgatgaagctgaaatttgcttatct
gaaatgcgtctgtacactccgggaactgaagctgatagggaaggcaaagcccccgctata
tattctaaagttactcaaaaggcagatattattcaagttacgggtgatttcttggctgaa
ttcaaacaattgcagtgtcttcaacctcgtggccgttatgatgttaagttatatccaagt
tttatccacttgcatggcaagtcttacgactttaaagttccaaagaatactattactcgg
ttgatggtgcttcctcatcccgataatcggcagatattctttgctgttcaacttgatcca
ccgatcaaacatggtcaaaccagatatcattttgtagtttcccttttcgacaaggattcg
cacataaacttagagatggctgcaacagaagactggcttcaggagcagttcaatggaaaa
ttaactcgaaatatttccggaccggaatatgaagttgtggctcgcgtgttcaaggttctg
tatgatcagaaagttacagtccccggaagcttctctgcaaaaggcggtggttgtgcagtt
gcatgcagttataaagcgtctgttggtttgttgtatccattagagagaggatttacattc
gtgccccgtcctccgatttccatacgtttcgacgaaatagtagctgtacaattttcccgt
gggacaggtgctcaaagatcttttgattttgaggtggaaactcgtaatggtttaacacat
acattcacttctatcgaaagagatgaatatcatcatttgtacgattttgtaactgctaaa
aaacttcgtgttaaaaatatcagttcagaaaacaaaactactaatcctggtgatgacgtt
tggtcgtcatctgatgaatcacatgatgcttatatggagaaagtgaagacagaagctcga
gaacgaacaactgaaatggatgatgacgatgacgacgatgaagatgatgaagatttcaaa
ccaccggaatctgatggttctgaacttgcagaagaatatgatagtaatgttcaaacaact
acaagtgaagatgaatctggagaaaacgatgatgacgatgattcggaagaggacgaaacg
aacattagtaatgaaacaaaacaaccatcaaaacgacaaacaaaaaaacaaaaaaaacct
aaagatcctaatgcaccaactcgtccactttctgcttatttcttatggtttaatgagaat
agagagaaaattgctaagaatttaggtggacaaaattctgttgccgaagtagctaaagct
gctggagagatttggcgaaatatggatagtacagcaaaatcaagttatcaatcaagagtt
gatgaattaaaaaagaaatatcaagaagatttacgtatatatcaatcaaatttaggatct
aataaagaaccagatttatcatcagattctagtagttaa
DBGET
integrated database retrieval system
