Schistosoma mansoni: Smp_148990
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Entry
Smp_148990 CDS
T01095
Name
(RefSeq) nucleolar protein NOP56, putative
KO
K14565
nucleolar protein 58
Organism
smm
Schistosoma mansoni
Pathway
smm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Smp_148990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smm03009
]
Smp_148990
Ribosome biogenesis [BR:
smm03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
Smp_148990
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
GWT1
NOP5NT
DUF445
Phage_min_cap2
Motif
Other DBs
NCBI-GeneID:
8353273
NCBI-ProteinID:
XP_018645649
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Position
4:<932207..945574
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AA seq
649 aa
AA seq
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MKSSFEKFHTLPINIIIAYLRSTIYILSCIMIYAIDLPICPRRFAKSDINDLGLMDVGTG
LFIYASSISGSKVVWYMNLDRDHRKSVFHCILNTVIPCLLLGLLRTLFIQLSNYHQSITE
YGIHWNFFYTVALIRAISLIMTTDNLISNYLTTFSLKKQIQLYYIISGICLIVSELLPII
ICPKYFQTRWQFNPRTLHYINDNRSKSLWIANFEGVDMLVLFETAAGYAVFKVHDEKGIR
EIDDLAKAFEDTATMNQLIQLERFVQFKDTKDALVAASDIMEGKLSKKLKKLLKKLYVKE
LRDDVLAVADKKLSVDINTKMSIPTVSDSLVQNLMRGIRTHIDNLLPVVEDSHMMRMRLG
LAHSLDRYKLKCNPDKIDTMIVQAVGLMDELDKEINNYIMRAKEMYGWHFPELSKIVLDN
VTYVKVVKRIGHRTNSNVDLSDLVPDEIASQIREASIVSLGTEVIDEDITMINELCDQVL
EASASRTQLHDYLIKRMVAVAPNLTALVGELLGARLIARAGTLVNLAKHPASTVQILGAE
KALFRALKTRHNTPKYGLLYHATLVTQSDNQFKGKMSRMLAAKASISARLDALGEEGADT
EMGIRARAYLEKRLRQLEAGTFNPKLSAVKRGLKSEDGQPKSKKMKVDE
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcttcctttgaaaagttccacactttacctattaatattataattgcttattta
cgtagtaccatctatatactttcatgtattatgatttatgctattgatttaccaatttgt
ccaagacgttttgctaaatctgatatcaatgatcttggcttaatggatgttggcacaggt
ttatttatatatgcatcaagtatatccggttctaaagtagtttggtatatgaatcttgat
cgagatcatcgtaaaagtgtttttcattgtatattgaatactgtgataccatgtttacta
ttaggattattaagaacattattcattcaattgtcaaattatcatcaaagtattactgaa
tatggtattcattggaatttcttttatactgttgcattaatacgtgccatatcacttatt
atgactactgataatcttatcagtaattatttgacaacattttcattaaaaaaacaaatt
caattatattacattatatctggtatatgcttaatagtctctgaattattgccaataatc
atttgtccaaagtattttcaaacaagatggcagtttaatccaagaacattacattatata
aatgataatcgatcaaaatctttatggattgctaattttgaaggcgtggatatgttggtt
cttttcgagacagctgcgggttatgcagtttttaaggtccatgatgaaaaaggtattcgt
gaaatcgacgatttggccaaagcattcgaagatacggccacaatgaatcagctaatccag
cttgagcgctttgtccagttcaaagatacgaaggatgcattagtagctgcttcggacatt
atggaaggaaaactatctaaaaaattaaaaaagcttttgaaaaagttgtatgtcaaagag
ctaagagacgatgtgcttgcagttgccgataaaaagttgtcagtggacattaatacgaaa
atgagtataccaacagttagtgattctcttgtgcaaaaccttatgcgaggaatacggaca
cacattgataacctccttcctgttgttgaagacagtcacatgatgaggatgcgcttgggt
ttagctcacagtcttgatagatataaactgaaatgtaacccagacaaaattgataccatg
atagttcaggcagtcggccttatggacgagctagataaagaaataaacaactatataatg
cgtgctaaagaaatgtacgggtggcattttcctgaattgtcgaagatagttttggataat
gtaacatacgtcaaagtagtcaaacgcatcggtcatagaacaaattcaaatgttgacttg
tcagacctcgtgccggatgaaatagctagtcaaattagagaggcctctatagtctcccta
ggaacagaagtaatcgatgaagatattactatgatcaacgaactgtgcgatcaggtactt
gaagcttccgcttcccgtactcagctccacgattatcttatcaagcgaatggtggcagta
gctccaaatttgacagctctcgttggagaacttttgggcgcaaggctgatagctcgggca
ggaacacttgtcaacctagctaaacatcctgcttcaacagtccagatactaggagctgaa
aaggcattattccgagcattaaagacacgacataacactccgaaatatggtctgttgtat
catgccacactagtgacacagtcagacaatcaattcaagggtaaaatgtcacgaatgttg
gctgcaaaagcatcaatatcagctcgtctagatgctcttggtgaagagggtgctgacaca
gaaatgggcatacgagcaagggcatatttagaaaaaagacttcgacagttagaagctgga
acttttaatccaaaattatcggcggttaagcggggactaaagtcagaggatggtcaaccg
aaatcaaagaagatgaaggtggacgagtga
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