Schistosoma mansoni: Smp_149230
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Entry
Smp_149230 CDS
T01095
Name
(RefSeq) iroquois homeobox family transcription factor
KO
K24889
iroquois-class homeodomain protein IRX
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smm03000
]
Smp_149230
Transcription factors [BR:
smm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
Smp_149230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
8343681
NCBI-ProteinID:
XP_018652451
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All DBs
Position
4:28562038..28577520
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AA seq
629 aa
AA seq
DB search
MYVVETNGYNPIEISEKSYSHLNVYKHCDKQCDPPPPAPPVPPPAPLPHPHHQHHHSTFY
SPNHESTDMMPLTKKSRISSSNELNFILTTTSHQCTSSITTSSKSLFHSIEFGIHNTPKS
NETIDLQYNSGFRPRFQYPHQYHSNYQSNNNDIDQHQSSYHNDTTCQSTSPLHNYFSSFT
FNHLPYYYHLNSKHSNQYDLNNGHELLNHSILNGNNGVDYLHKSNMNTSSSSNNSNGRHM
IPSFHSSIINTMNENNNPITFPSVIPNLSSNQTNPLTISSSYTRNVNECRDNISKLSNIN
WTSNNTSSHPYRGQIGYSNEFANTTRRRNATKESTTTLKAWLQEHIKNPYPTKGEKIMLA
IITKMTLTQVSTWFANARRRLKKENKMTWTPKHRDKAESKLVNSSECNLSNWTDTIPTSL
SINKYDSIPFGQQSYQNLSFPYYMQENLHVSPYIHGLDTSNKVYSSFNPIISITTTTNSI
YTNFPNTMHLLTSKSFPLSNNNHSQLINPMNTIHNHDRISFTNLFNPKDLLSSKMNSIHD
NYGTNIDSMTDNNNYQQQRLPFLSEINNHNNSTTSITIPSTMTMSTINSLWSSQLKQLTR
LDDGGLDNKLNHNTFYQPIYNSMYTMPTR
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtatgttgttgaaacaaatggttataatccaattgaaatatcagaaaaatcttattca
catttaaatgtttataaacattgtgataaacaatgtgatcctccacctcctgcacctcct
gtaccccctccagctccacttcctcatcctcatcatcaacatcaccattcaactttctat
tcacctaatcatgaatcaacagatatgatgccattaacaaaaaaatctagaattagttct
tcaaatgaattgaattttatattgactactacatctcatcaatgtacatcatctataaca
acatcatctaaatcattatttcattctatagaatttggtattcataatacacctaaatca
aatgaaactattgatttacaatataattctggatttcgacctcgttttcaatatcctcat
cagtatcattcgaattatcaaagtaataataacgatattgatcaacatcaatcttcttat
cataatgatactacatgtcaatcaacatcaccattacataattatttctcttcatttaca
ttcaatcatttaccatattattatcatcttaattctaaacattctaatcaatatgattta
aacaatggacatgaactattaaatcattcaatattgaatgggaataatggtgttgattat
ttacataaatcaaatatgaatacaagttcatcatcgaataatagtaatggtcgacatatg
ataccttcatttcattcatctataattaatacaatgaatgaaaataataatcctataaca
tttccttctgtaataccgaatttatcatcaaatcaaactaatccattaacaatatcatca
tcgtatacaagaaatgtaaatgaatgtagagataatatatctaagttaagtaatataaat
tggacatcaaataatacatcatctcatccttatagagggcaaataggatattcaaatgaa
tttgctaatacaacaagacgaagaaatgctacaaaagaaagtacaacaacattaaaagca
tggttacaagaacatattaaaaatccttatccaactaaaggagaaaaaattatgttagct
attataactaaaatgactttaacacaagtatctacatggtttgctaatgcaagaagacgt
ttaaaaaaagaaaataaaatgacatggacacctaaacatagagataaagcagaatcgaaa
ttagtgaattcatctgaatgtaatttatcaaattggacagatacaataccaacatcatta
tcaatcaataaatatgattcaataccatttggacaacaatcttatcaaaatctctcattt
ccatattatatgcaagaaaatttacatgtttcaccatatattcatggattagatacatcc
aataaagtatattcatcatttaatccaataatatcaataacaactacaacgaattcaata
tatacaaattttcctaatacaatgcatttattaacctcgaaatcatttccccttagtaac
aataatcattcacaattaattaatcctatgaatactattcataatcatgatagaatatca
tttaccaatctatttaatcctaaagatttattatcatctaaaatgaatagtattcatgat
aattatggaactaatattgattcaatgacagataataataattatcaacaacaaagattg
ccatttctatcagaaatcaataatcataataatagtacaacatccataacaataccatct
actatgacaatgtcaacaatcaattcattatggtcatcacaattaaaacaattaacacgt
ttagatgatgggggactagataacaaattaaatcataatacattttatcaaccaatttat
aattcaatgtatactatgccaacaagataa
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