Schistosoma mansoni: Smp_150980.1
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Entry
Smp_150980.1 CDS
T01095
Name
(RefSeq) P53 inducible protein-related
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_150980.1
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
Smp_150980.1
Factors involved in mRNA localization
Other mRNA localization factors
Smp_150980.1
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
BP28CT
Motif
Other DBs
NCBI-GeneID:
8342734
NCBI-ProteinID:
XP_018652532
LinkDB
All DBs
Position
4:complement(31458642..31498182)
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AA seq
1112 aa
AA seq
DB search
MEVLQHLRGPTPTTVREVTNFPILLQVIILCIRFISDQSNTDTNFSDITAFKSAFARSAE
DARDQPNRIKIYEKTKEILEPHCLKLKQFMFFQVKFGFSSRSRIQVIAFSLYLLDSGRIV
DGKQVGVCLNKIAKRLNIGKLDRILKECEVVNLFGDMSVEPFSYIRQTASYDPSKWPECN
SAKVSGQGVILTHMARFQEEYTSLTSDLAWHTNTTSIRLNERSAKENQELYDLALRGLQY
LSGWSVQVLDTFSWKLAHCASGFTNHECPKDAENYEKATRYNYNSEERFAMIEIISMIKS
VQTQLLRLEACYSEAIGRSVYRELQAIVVGQLSAPLLKAQKKKERIMLARLILAIQATWS
NSTMAAVAASLANNNDSPTGSISTSSIFDSNKRRVGPSSSQLYLVRTMLELMVEQVSSSK
QMIRKELDTATLSAIDTFLKHSFYWPYLLNFSETLIKCCDLSQLWYREFFLEMTNGACIQ
FPIEMSLPWIFTDHILETEHPGYMEYLFYMLDLYNDAADCALNRFRRRFLYEEIEAEANL
VFDQLVYKLSDKIFRHYKRYASSILLDKRFRAEAQRTASWREPYPPPNRYTAALLRQRNI
QLLGRSIDINRLICQRMTTAIYKSIEVAISRFHSSDITGIIELETAIECNRLCHRMLSEQ
LELDDFDALLREADNLVTSRLGKITVHVFWELTYDLVKNYCYNDATNRFVPTNFTLTEVL
EREKPPTVEAQYVWGSRSLNTCFETIFKLYRGFVGAPHFSAICRLLGYRGLFVVTAEVMK
VAQSLLNQTLRDYVCRLVLLMPKSLTLPSEKAESDAVFSALYTQLQQIYKYTDLRTNVFQ
NFREFGNILICCLQLEKNLSIEDSCDLRHAGPFIGQMPRQFFPPIPSHEELQKKQESMNI
VLVVSRIGTEDQLSLAKENEILTKERLCSGLTLFEFVLNKIKNFLHEEDSDGNTWNRLSN
IAKRNSICNGTTTHYNNNDILGLESYTHFHRLWSAIQLVFCTPFGQNEYTIEEMFGEGLN
WAGCAIILLLGQQRQFEALDFGSLILRLQRIDKKDVTPMGVSLERMAARLSRFSVLNRQI
FSTLNVYLHPVDRLDESSVRVRQFPIPTWSKS
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcctccaacaccttcgaggacctacacctactacagtgagagaagtgactaac
ttcccaatcttgttgcaggtaattattctgtgcattagattcatttctgatcagtccaac
actgatacgaattttagtgatataaccgcatttaaatctgcttttgcacgttcagctgaa
gatgcacgggaccagccaaatagaataaaaatatatgaaaaaacaaaggaaatattagaa
ccacattgtctaaagctgaaacagttcatgttctttcaagttaaatttgggtttagttcc
cgttcacgtattcaggttatagctttttccctatatcttctcgattcgggtcgtatagtt
gatggtaaacaagtaggcgtctgtctgaataagattgctaagcgtcttaacatcggtaaa
ttggatcggattctgaaggaatgtgaagtcgtcaatctgttcggtgatatgagtgtggaa
ccattttcatatattcgtcaaacagcgtcgtatgatccatctaaatggccagagtgcaac
agtgctaaagtttctggtcagggagtgatcttaacacatatggcgagatttcaagaggaa
tatacttcattgacatccgatttggcttggcatacaaatacaacatcaattcgtctgaat
gaacgttctgccaaagaaaaccaagaactttatgatcttgcacttcgaggtcttcagtat
ttatctggttggtctgttcaagtgttagatacattttcatggaagcttgctcactgtgcc
agcggtttcacgaatcatgaatgcccaaaagatgctgaaaattatgaaaaagccactcgt
tataattacaattcagaagaaagatttgctatgattgaaataatcagtatgattaaatct
gttcaaacacaacttttacgtttggaagcttgttattcagaagcgattggtcgttctgtt
tatcgagaactacaggcaattgttgttggccaattaagcgccccattgcttaaagcacaa
aagaagaaagaacgaatcatgctggcacgtttgatacttgcgattcaagcaacatggtcg
aattctacgatggctgctgtcgctgcttcgctagccaataataatgacagtccaacagga
tcaatcagtacaagtagtatatttgattcaaataaacgtcgagttggtccatcatctagt
caattgtatttagtacgaactatgttagaattaatggttgaacaagtttcatcaagtaaa
caaatgatacgaaaagaattggacactgcaacattatcagcaatagatacatttcttaag
catagtttttattggccatatcttctgaatttcagtgaaactttaatcaaatgttgtgac
ctatctcagctatggtatcgtgaattcttcttagaaatgactaatggtgcttgtatacaa
tttccaattgaaatgagtttaccatggatattcactgatcacattctagaaactgaacat
cctggttatatggaatatctattctatatgcttgatctttacaatgatgctgctgattgt
gcgttaaatcgatttcgacgacgatttctgtatgaagaaatcgaggctgaagcaaattta
gtctttgatcaacttgtttataaactaagtgataaaatatttcgacactacaaacgttat
gcatcatcaattttattagataaacgatttcgagctgaagctcaacgtaccgcatcatgg
cgtgaaccttatccaccgcctaatcgttatactgcagctttacttcgacaaagaaatatt
caattacttggtcgttctattgatataaaccgattgatttgtcagaggatgactacagca
atatataaatcaattgaagttgctatttcacgttttcatagttcagatataacaggaata
attgaattagaaacagctattgaatgtaatcgactatgtcatagaatgttaagtgaacaa
ttggaattagatgatttcgatgcattattacgtgaagcagataatttggtaacttctaga
ttaggaaaaattactgttcatgtattttgggaattaacatatgatcttgttaaaaattat
tgttacaatgatgctactaacaggtttgtaccaacaaacttcacattaactgaagtgtta
gaacgtgagaaaccgccaacagtagaggctcaatacgtttggggcagtcgttcattaaat
acatgctttgaaactatatttaaattatatcgtggttttgttggtgcacctcatttttct
gctatttgtcgtttattgggttatcgaggtctatttgttgttacagcagaagtaatgaaa
gttgctcaatcattgctaaatcaaacattacgcgattatgtttgccgattggtactcctt
atgcctaaatcattgacacttccatcagaaaaagcagaatctgatgctgtattctcagct
ttatacactcaattgcaacaaatctataaatatacagatttaagaactaatgtatttcaa
aattttcgtgaattcggaaatattcttatctgttgcttgcagttagaaaagaatttatca
attgaagattcatgtgatcttcgtcatgcagggcctttcattggacaaatgccaagacaa
ttctttcctcctattccatctcatgaggaattacaaaagaaacaagaatcaatgaatatt
gtattagttgtatcacgtattggtactgaagatcaattatctttagctaaagagaatgaa
atactaacgaaagaacgactttgttctggtttaacactattcgaatttgttcttaataaa
attaaaaattttcttcatgaagaagattctgatggaaatacttggaatcgtctttccaat
attgctaaacgtaattccatatgtaatggaactactacacattataataataatgatata
cttggcttagaaagttatacacattttcatcgtttatggtctgctattcaattagtattt
tgtacaccatttggacagaatgaatatacaattgaagaaatgtttggtgaaggattaaat
tgggctggatgtgcaatcattttattattaggtcaacaacgtcaatttgaagcacttgat
tttggtagtcttattttacgactacaacgaatcgataaaaaagatgtgacaccaatgggg
gtttctctggaacgaatggctgcacgtttaagtcgtttctccgtacttaatcgtcaaata
ttttctacattaaatgtatatcttcatcctgtcgatagactagatgaatcaagtgttcgt
gttcgccagtttcctatacctacctggtcaaaatcataa
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