Schistosoma mansoni: Smp_151070
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Entry
Smp_151070 CDS
T01095
Name
(RefSeq) putative suppressor of ty
KO
K15172
transcription elongation factor SPT5
Organism
smm
Schistosoma mansoni
Pathway
smm03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Smp_151070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smm03021
]
Smp_151070
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_151070
Transcription machinery [BR:
smm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Smp_151070
RNA polymerase I system
Smp_151070
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Smp_151070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
Spt5-NGN
KOW2_Spt5
KOW
KOWx_SPT5
KOW5_SPT5
KOW1_SPT5
Spt5_N
KOW7_SPT5
Motif
Other DBs
NCBI-GeneID:
8342753
NCBI-ProteinID:
XP_018652525
UniProt:
A0A3Q0KPW2
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Position
4:complement(31255777..31270827)
Genome browser
AA seq
846 aa
AA seq
DB search
MSDCSNSDESASPSPPKKKNRTKKYTKKDHYYVNDEDEEDDDEEDDEEEEDVDEDEEPAL
TSKKKRRMNFAIKDMFHDEASVDEDDEEEDEEYDDDGELIGPEDEEALDAVPAARELDSR
RRIREIMDQDEEEIERYYQERYENQNYVDRFGDGEAMADSIVQKERLPGIKDPNLWALRC
KMGEEKATVLALMRKFIAYQFSDTPLQIKSAFAKEGLKGYIYVEAFKQTHVKQAIDGITA
LRLSMYKQQLVPIEEMTEVVRVVKETGQLKPDQWVRIKSGLYRDDLALVEYVEDAQNLVG
LKLVPRIDYERKRNRGTETEDDNKFKRFKRPAPALFNASKLSDRVQRDGSSMVFEGNRYD
ADGFLHKQFRINAVFTEGIRPTLAELERFHHTPDSLQIAAAAANAAANLTSAVHVEIASN
HCFTPGDVVEVCEGDLKNLRGKVVSIEGNNRIIVQPNHSDLREPIPFTPVELRKFFNQGD
HVKVLSGRHVNETGLVIRFDPSLAVVLSDHSMNEMKVAPKDLRLWQDRATTVESSGHVQL
MDLVQVDPQTVGVVVHVERDQVSVLTCFGKVVNLKSNTALRRLNTVRRPPQALDHNGNSI
QLKQTVRLLEKPYCGLIGEVKHLYRSWAFIYCRTHLENAGLVVAKTRQLSALNTSQGGNE
QSNAENGISMKTITPISGARNFGGNNEGGRGKGSRNERQLVGRTALIVKGTLKGLLGIIC
DATPTHVVLELHSQFKKVPVARENMALLDSGGRIMDTQYGATTPRITPMREMRTPQLAYG
AQTPHAASTTPRGDSTPLPSAFNAGMATPKISNLDEPMTPSSSFLWTSSDLHRMSNSSTH
SLSDTE
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgagtgactgttcaaattcagacgagtcagctagcccgtctccacctaaaaagaaaaat
agaaccaaaaagtacactaaaaaagatcattactatgttaatgatgaagatgaggaagat
gacgacgaagaagacgacgaggaggaggaggatgtcgatgaagatgaagaacctgcatta
acgtcgaaaaaaaagagaagaatgaactttgcaattaaggatatgttccatgatgaagct
tcggtcgacgaagacgatgaagaagaagatgaagaatatgacgacgatggggaactgatt
ggtccggaagatgaagaggccctggacgctgtacctgcagctcgagaattagattctcgc
cggagaatacgtgagatcatggaccaagatgaagaggaaatagaaagatattatcaagag
cgttatgagaaccaaaattatgtcgatcgttttggtgatggtgaggctatggctgatagt
attgttcaaaaggaacgtcttccaggtatcaaagatcctaacctctgggcacttcgatgt
aaaatgggtgaagaaaaggctactgtgcttgcactgatgcgtaaatttatagcctatcag
ttttctgacactccattacaaattaagtcagcctttgccaaggaaggtttgaagggttat
atttatgtcgaggcttttaagcaaactcatgttaaacaagccatagacggtataacagcg
ttacgactttctatgtacaaacaacaacttgttccaattgaagaaatgacagaagttgta
cgtgtggtgaaagaaactggtcaacttaaacctgaccagtgggttcggattaaatctgga
ctttatcgtgatgatttagcattggttgaatatgtagaagatgcacaaaacttagttggt
cttaagttagtgccacgaattgattatgaaagaaaacgtaatcgtggcacagaaacagaa
gatgataacaagtttaaacgtttcaagcgcccagcaccagcactattcaatgcatcaaaa
ttatctgatcgtgtacaacgtgatggatcatcaatggtttttgaagggaatcgatacgat
gctgatggattcttgcataaacaatttcgtattaatgctgtttttactgaaggcattcga
cctacactagctgaactcgaaagatttcatcatactcctgatagtctacaaatagctgct
gctgctgctaatgctgcagctaatttaacttcagctgttcatgttgagattgcttcaaac
cattgtttcactcctggagatgttgtcgaagtatgtgaaggtgatcttaagaatcttcgt
ggtaaagttgtctccattgaaggcaataacaggattattgttcaaccaaatcattctgac
ttacgagaacccataccatttacaccagtggaattgagaaagttcttcaatcaaggtgat
catgtcaaggtcctcagtggtcgacatgttaatgaaactggtttagtcatacgttttgat
ccaagtctagctgttgttttatccgatcatagtatgaatgaaatgaaagttgcaccgaaa
gatttacgtttatggcaagatcgtgctacaactgttgaatcatccgggcatgtacaattg
atggatttagtacaagttgacccacaaactgtcggtgttgttgttcatgttgaacgtgat
caagtctctgtgctaacatgttttggtaaagttgttaatttaaaatcgaatacagcatta
cgtcgattaaatactgttcgtcggccaccacaagcattagaccataatggaaattctata
caattaaaacaaactgttcgcttattagagaaaccatattgtggattaattggtgaagtg
aaacacttgtatcgttcatgggcattcatatattgtcgtacacatttagaaaatgctgga
cttgttgtagctaaaactcgtcaactttctgcattaaacacttcacaaggaggtaatgaa
caaagtaatgcagaaaatggtatctcaatgaaaacaatcacacctatcagtggtgcaaga
aactttggcggtaataatgaaggtggacgtggaaaaggtagtcgtaacgaacgtcagcta
gttggcaggacagctttaattgttaagggtacattaaaaggtttattgggtattatatgt
gatgcaacaccaacgcatgtagtgctggaattacatagtcaatttaaaaaagtgcctgtt
gcacgtgaaaatatggctttgttagatagtggtggtcgtatcatggatacacaatatgga
gctactacacctcgtattacaccaatgcgtgaaatgcggacaccacagttggcatatggt
gctcaaacaccgcatgcagcaagtacaactcctcgtggtgatagtactcccttaccgagt
gcatttaatgctggcatggctacaccaaaaattagtaatcttgatgaaccaatgactcca
agttctagctttctatggacttcaagtgatcttcatcgtatgtcaaattcaagtactcat
tcattgtccgatactgaataa
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