Schistosoma mansoni: Smp_152650
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Entry
Smp_152650 CDS
T01095
Name
(RefSeq) SWI/SNF complex-related
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
smm
Schistosoma mansoni
Pathway
smm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Smp_152650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smm03021
]
Smp_152650
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_152650
Transcription machinery [BR:
smm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
Smp_152650
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
Smp_152650
PBAF complex
Smp_152650
GBAF(ncBAF) complex
Smp_152650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Inhibitor_I36
Motif
Other DBs
NCBI-GeneID:
8345034
NCBI-ProteinID:
XP_018646257
LinkDB
All DBs
Position
Unknown
AA seq
1306 aa
AA seq
DB search
MKAEEFMNTNTSATAVTNNSSAHYTGSFTPTSHTDSGSKKKRRRSPSPSASDSTMPNVSG
KKRRPGSSFTGSHERSSRGPSNHGGSRKIRKEDEDESFSCQTGPQDPNKEDTNDTDITKD
FDDPEPPNKITQITSSNSSTTSGFNVSRPTRTNNSINASHSGGGELGIGKSLFDLDEDNE
TTGDAMDGGLNEYHTSGGISGAGEMNSTNCPQNGDENRQGVIHTDLSVTEQAHCIVIPSY
SAWFDYNAIHGIERRALPEFFNGQNKSKTPEVYLAYRNFMVDTYRLNPQEYLTFTACRRN
LTGDVCSILRVHAFLEQWGLINYQVTAPLTTITNSSSSSNGMNNLNGTSTTTICATTTTT
TTGNNSSSEAARLAVAASLGPPSTAHFHILADSASGLQPIGTQNLAGTNSIIPPITTTNN
NSTIDNSSNITTTTTTTTLTDGNQLDPYKIQSNNDGNGNDTTTTSISNNITKQELQGIDC
ANATTTLNPTVPTSVTTVSSGVCITNSTQPLNKQPIIGDPNLRTDQYLTNASIAKTTCLN
STDIRSQPSTGNLDATSQSVIVNNKLMKGATQSGWSDQETLLLLEALELYRDDWNKVAEH
VGSRTQEECILHFLRLPIEDAYLEGSDPILNLTSLANANHPTLPFSKAANPILSTVAFLA
AAVDPRVASAAAQAALIEYAKMRDEVPAGLLREHKARVENAVKLGHQIDPQKFGLDEVGG
NNQVIESEKLCKSSSVQSITTTEKLSVVANEQMSIDNETTNRKETVPMDTIITAVSTDDT
MNESKVTENRDKHDDVDNNVTTKLEKYKMEENVESDSNKTEHVTTDEQQQDSTHVNQTLT
TVVNETAAAAAAEVVGSDSIQTKSSDEQLKDTIEQEQRTKPVLDSSTSQPLEKSANEQVS
DEKSTTNTSSLSSSLPPNPNSLGTAAACALAAAAIKARHLASVEEKRIKGLVAQLVETQL
KKLDIKLKQIQELESIMEREYEMIEQMRQQLLQERQAFHMEVIKTMENRARALMHHHNQQ
QQQSSNVVLPQQQQPQSQIPLQPTFSSTQGSCPVVMNPVLHSNPPIQPGPHVIPPTGSNY
AAQTVPISNDPRSVLNSSSTNLTVYPSSNYGTITTTTPSALPSPNQQLPSSGHISPTPTQ
LIQHHPRDEFQAQPPMTTATTTPTQPTSNTLPQTETTCDSWSESVYPITSEPQTVRQIIE
PSNDAPVPNITVTFPQNVVTHSDPSSVVVTTSSKITQPIDSVNEVVFFESTKHHTPPSTE
VNACTVASLLSDDNNVPVPPVSSPSVTDTNPPELSTSNEENIVQGE
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctgaagaattcatgaatacaaatacatcggcgacagctgttactaacaattct
tccgcgcattatactggctcttttacaccaacttctcatacggatagtggaagtaaaaag
aaacgtcgtagatctccttctccgtcagcatctgactcaactatgccaaatgttagtggt
aagaaaagacgccctggttcatcctttactggttcacatgaacgttcaagtcgtgggcca
agtaatcatggtggatctcgtaaaattcgaaaagaggatgaagatgaatcattttcatgt
caaactggtccacaagatcctaacaaagaggatacaaatgatacagatatcactaaagat
tttgatgatcctgaaccaccaaataaaattacacaaattacatcatcaaatagttccaca
acatcaggattcaatgtatcacgaccaacacgtactaataatagtattaatgcatcacat
agtggaggaggtgaattgggtattggtaaatcattgtttgatctggatgaagataatgaa
acaaccggtgatgctatggatggaggtctcaatgaatatcatactagcggcggtataagt
ggagctggtgaaatgaattctaccaattgtcctcaaaatggtgatgaaaatcgacaaggt
gttattcatactgatttaagtgtcacagaacaagctcattgtatagtgataccatcttat
tcagcttggtttgattataatgctatacatggaattgaacgtcgtgcattgccagaattt
ttcaatggtcaaaataaaagtaaaacaccggaagtttatttggcatatcgtaattttatg
gttgatacatatcgcttaaatcctcaggaatatcttacatttacagcttgtcgaagaaat
ctcactggtgatgtttgttcaattcttagagtacatgcatttctagaacaatggggttta
attaattatcaagttactgcaccattaacaacaataacaaattcatcatcatcatcaaat
ggaatgaataatttaaatggtacttctactactactatttgtgctacaactaccactact
actactggtaataattcatcatcagaagctgctcgtcttgcagtagctgcaagtttagga
ccaccaagtactgcacattttcatatattagctgatagtgctagtggtctacaaccaatt
ggtacacaaaatttagctggaacaaattcaataattccacctattactactactaataat
aatagtactattgataatagtagtaatattactactaccactactacgacgactttaact
gatggaaatcaattagatccgtataaaatccagtctaataatgatggtaatggtaatgat
actactactacctcaatcagtaataatataactaaacaagaattacaaggaatcgattgt
gcaaacgcaacaacgacgctaaatcctacagttcctacctctgtaacaactgtcagttct
ggagtatgtattactaatagtacacaacctttaaataaacaaccaattatcggtgatcca
aatttacgtacagatcaatatcttactaatgcaagcattgcgaaaactacttgtttaaat
tctacagatattcgtagtcaaccttctacaggtaatttagatgcaacatcacagtcagta
attgttaataacaaacttatgaaaggtgctacgcaaagtggttggagtgatcaagaaact
ttattgttattagaagctttagaactttatcgagatgattggaataaggttgctgaacat
gtaggaagtcgtacacaagaagaatgtattcttcattttctacgtctacctattgaagat
gcttatttagaaggttcagatcctatattaaatttaacatcattagcaaatgctaatcat
cctacattacctttttcaaaagctgctaatcctattctatcaactgtagcatttctagcc
gctgctgttgatccacgtgtagcatccgcggcagctcaagcagcacttatagaatatgct
aaaatgcgtgatgaagtaccagctggtctattacgtgaacataaagcacgtgttgaaaat
gcagtaaaattaggtcatcaaattgatccacaaaaatttggtttagatgaagttggtggt
aataatcaagtaatagaatcagaaaaattatgtaaatcatcatctgtacaatcaattaca
acaacagagaaattatcagtagttgccaatgaacaaatgtcaattgataatgaaacaact
aatcgtaaagaaactgtcccaatggacacaataataacagctgtttccactgacgacact
atgaatgaaagtaaagtcactgaaaatcgtgataaacatgatgatgttgataataatgta
acgacaaaattagaaaaatataaaatggaagaaaatgttgaaagtgatagcaataaaact
gagcacgtgacaaccgacgaacaacaacaggattcaactcacgtaaatcagacactgact
acagtagtgaatgagactgctgccgctgctgctgctgaagttgttggcagtgacagtatt
caaacaaaatcatctgatgaacaattgaaagatacaattgaacaagaacaacgcactaaa
cctgttttagattcttctacttcacaaccactggaaaaatcagctaatgaacaagtatct
gatgaaaagtcaacaactaacacttcatcattatcatcttcattaccaccgaatccgaat
agtttaggtacagctgcagcgtgtgcattagctgctgcagctattaaagcacgtcattta
gccagtgttgaagaaaaacgtatcaaaggtttagttgctcaattagttgaaacacagttg
aaaaaactcgatataaaacttaaacaaattcaggaattagaaagtatcatggaacgtgaa
tatgaaatgattgagcaaatgcgtcaacaattattacaagaacgtcaagcatttcatatg
gaagtgattaaaacaatggagaatcgtgccagagctttaatgcatcatcataatcaacaa
caacaacaaagcagtaatgtcgttttaccccaacaacaacaaccacagtcacaaattcct
ttacaacctaccttttctagtactcaaggttcttgtccagtagtaatgaatccagtccta
cactctaatcctccaatacaaccagggccccatgttattccaccgactggtagtaattac
gcagcacaaaccgtgccaatttctaatgacccaagatcagttttaaattcttcctctaca
aatctaacagtttatccatcatcaaattatggaacaatcacaacaacaactccgtctgct
ttgccttctccaaatcaacaactaccatctagtggacatatttctccgacacctactcaa
cttattcaacatcatccacgcgatgagtttcaagcacaaccaccgatgaccacagcgaca
acaacaccaacacagccaacgtctaatacactaccacaaacagaaacaacctgtgattct
tggtcagaatctgtctatcctattacatcagaaccacagactgttcgtcaaattattgaa
ccatcgaatgatgcgcctgtacctaatatcactgtaacatttccacaaaatgttgtaact
cattcagatccttcttcggtggttgttactacaagctctaaaattacccaacctattgac
tcagtcaatgaagtggtattttttgaatcaaccaaacatcatacaccaccatctactgaa
gtgaatgcatgtactgttgcaagcttattgtcagacgataataatgttcctgttccgcct
gtttctagcccatcagttactgatactaatcctcctgaattgtctacatcgaacgaggag
aatattgttcaaggagaatag
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integrated database retrieval system
