Schistosoma mansoni: Smp_152740
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Entry
Smp_152740 CDS
T01095
Name
(RefSeq) hypothetical protein
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
smm
Schistosoma mansoni
Pathway
smm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Smp_152740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smm03009
]
Smp_152740
Ribosome biogenesis [BR:
smm03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
Smp_152740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_ACSF4
Beta-prop_WDR5
Beta-prop_HPS5
Beta-prop_WDR3_1st
Beta-prop_EML
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40
WD40_Prp19
WDR55
Beta-prop_RSE1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
EIF3I
WDR90_beta-prop_4th
Beta-prop_RIG_1st
Myticin-prepro
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
8345743
NCBI-ProteinID:
XP_018648498
LinkDB
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Position
1:complement(<31447469..31463012)
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AA seq
780 aa
AA seq
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MQSRLFCTGALGRLLELDLQTSSIKGSCLLVGSPVARCMTVFEDNIVVGSDEGFITFFST
DKTDPAPKLTIPKLSGKILSVACTHQDEGILATGTSTGSLLLISIRDSVSKVMFTLTESN
KSCLIWALLFAGGFLFSGDSRGVVCIWDASVGGQLYSFSCHHADVLALASNLDGSIIFSG
GADAIIRRFEFSVSETGDGQWQCSGVIRGSRRDIHGLAFIPGHHHDPSAESSFSDVRFEP
HRLLAVGQDACLLVMSCESIEKGVGVFALAEKTLAVNVGIPQDEQIADNGYVAALPFWPA
SVAPSHPSPGYFVTLPIGSVHGTFGGQAGASRHLCLLHYPDKLCLVRLGQPLTSGHKKVF
KKYYSINLGPLQVIEIHPSKGMEFIKSSLSPCGSFIVYSDFKRTRLLKLDVAFKNKGRSF
CLSKAKVKPVEWSSNSHDSICGSTKSRNKRVRLDSWSKSSSNTSSSETETDTEEILQDAD
ILQYFTMDKSLQLSGGKDQRRLSIEDLSDTEQKKLNAITVPPSCLMAFTPKSEHLLLVTQ
KRGKFVCMSVENGSILWDRNIGEDDALDVRAHIMSVSNILTDCGYLIGLGCSDARVRLYD
SPTGSILFTCSCIDSVSGHSPLPVSIAFPNISEQSAESPITTLSKHRFSVLYTNGQLREW
KITIKQSNNVNNSDESDHPTSPPVTTKNIIDVGLNKWLVKFWRTMGEEISRSLGVFHSVN
YIEPNKWLLASNRFLVVLVSHKNIIQTEVLSESEIAVVSIDSRNITPQLAPPLQRKLYGT
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcaagattgttttgcacaggtgcactgggccgtctcttagagcttgatttacag
acttccagcatcaaggggtcttgtttattagtaggaagcccagtggctcgatgtatgacg
gtcttcgaggataacatagttgtaggcagtgatgaagggtttataacgtttttttcaacc
gacaaaactgatccagctcctaaacttacgattcctaagctctcagggaaaattctgtct
gtggcttgcactcatcaagacgaaggtattctggcaaccggcactagcaccggttctctt
cttctgatatctatccgtgatagtgtttccaaagtaatgtttacgctaacagaatcgaac
aaatcctgtcttatctgggctctactattcgctggtggatttttattttctggagatagt
agaggcgtggtgtgcatttgggatgcatctgtcggcggccagttatatagtttttcttgt
catcatgctgatgtccttgctttggcttccaatcttgatggttccattatttttagtggt
ggagcagatgctattatacggagattcgaattctctgtatccgagaccggagatggtcag
tggcaatgtagtggtgtaattaggggttctagacgtgatattcacgggctagccttcatc
ccaggtcaccatcatgatcctagcgcagaatcttccttctcagatgtccgttttgaacct
catcgtcttcttgctgtgggacaagatgcttgtctactagtaatgtcatgtgaatcaatc
gaaaagggtgttggagtctttgctttggctgaaaagactttggctgtcaatgttggaata
cctcaagatgaacagatagcagataatggatatgttgctgctctcccattttggcctgct
tctgttgccccctctcatccatcaccaggatattttgtaactttgcctatagggtcagta
catggtacttttggaggtcaggcaggtgcatctcgtcatttatgtcttctgcactaccca
gacaaactttgtttagtacgtcttggtcaaccactcacatctggccataagaaggttttc
aagaaatattattctataaatcttgggccacttcaggtgatagaaattcatccatctaag
ggtatggagtttattaaatctagtttatctccttgtggatctttcattgtctacagcgac
ttcaaacgaactcgactgctcaaattagatgtggcatttaagaataaaggaagaagtttc
tgtttgtcaaaagcaaaagtgaaaccagttgaatggagtagtaattcacatgattcaatt
tgtggttctacaaaatctcgtaataagcgagtacgtttggatagttggagtaaatcatct
tcaaatacatcatcttcagagacagaaacagacacagaagaaattctacaagacgctgat
atcctgcaatatttcaccatggataaatcactccagttatcaggtgggaaggatcaacgt
aggttgtctattgaggatttatctgatacagagcagaagaaattaaatgcgataactgtt
ccaccctcatgtttgatggcttttactccgaaatcagaacatctgttattagtgacccaa
aagcgtggaaaatttgtttgtatgtctgtagagaatggcagtattttgtgggatcgtaac
attggcgaagatgatgcgttagatgttcgagcccatataatgtctgtttcaaatattctt
actgattgtggttacttaattggacttggctgttctgatgcacgtgtacgcttatatgat
tccccaactggttctattctgttcacgtgttcctgtattgattcagtcagtggtcattca
cccttaccggtatcaatcgcattcccaaatatcagtgagcaatctgccgaatcaccaata
actacattatccaaacatcgtttctcagtattgtacacaaatggtcagctgagagagtgg
aagataactataaaacagtcaaataatgtaaataattctgacgagtcggatcaccctaca
agtcctccagtcacaacaaaaaatatcattgatgttggactaaacaaatggcttgttaaa
ttttggcgtactatgggtgaggaaatttcacggagtttaggagtatttcatagtgtaaat
tatattgaacccaataaatggctgttagcttcaaatcgattcttagttgttttagtttct
cataaaaacataatccaaacagaagttctatcagaatcagaaatcgcggttgtttcaatt
gattctagaaatataactcctcaactggctccaccattgcagaggaaactgtatgggacg
tga
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