KEGG   Schistosoma mansoni: Smp_152740
Entry
Smp_152740        CDS       T01095                                 
Name
(RefSeq) hypothetical protein
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
smm  Schistosoma mansoni
Pathway
smm03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:smm00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    Smp_152740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:smm03009]
    Smp_152740
Ribosome biogenesis [BR:smm03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    Smp_152740
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_ACSF4 Beta-prop_WDR5 Beta-prop_HPS5 Beta-prop_WDR3_1st Beta-prop_EML Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40 WD40_Prp19 WDR55 Beta-prop_RSE1_2nd Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_Vps41 EIF3I WDR90_beta-prop_4th Beta-prop_RIG_1st Myticin-prepro Beta-prop_SCAP
Other DBs
NCBI-GeneID: 8345743
NCBI-ProteinID: XP_018648498
LinkDB
Position
1:complement(<31447469..31463012)
AA seq 780 aa
MQSRLFCTGALGRLLELDLQTSSIKGSCLLVGSPVARCMTVFEDNIVVGSDEGFITFFST
DKTDPAPKLTIPKLSGKILSVACTHQDEGILATGTSTGSLLLISIRDSVSKVMFTLTESN
KSCLIWALLFAGGFLFSGDSRGVVCIWDASVGGQLYSFSCHHADVLALASNLDGSIIFSG
GADAIIRRFEFSVSETGDGQWQCSGVIRGSRRDIHGLAFIPGHHHDPSAESSFSDVRFEP
HRLLAVGQDACLLVMSCESIEKGVGVFALAEKTLAVNVGIPQDEQIADNGYVAALPFWPA
SVAPSHPSPGYFVTLPIGSVHGTFGGQAGASRHLCLLHYPDKLCLVRLGQPLTSGHKKVF
KKYYSINLGPLQVIEIHPSKGMEFIKSSLSPCGSFIVYSDFKRTRLLKLDVAFKNKGRSF
CLSKAKVKPVEWSSNSHDSICGSTKSRNKRVRLDSWSKSSSNTSSSETETDTEEILQDAD
ILQYFTMDKSLQLSGGKDQRRLSIEDLSDTEQKKLNAITVPPSCLMAFTPKSEHLLLVTQ
KRGKFVCMSVENGSILWDRNIGEDDALDVRAHIMSVSNILTDCGYLIGLGCSDARVRLYD
SPTGSILFTCSCIDSVSGHSPLPVSIAFPNISEQSAESPITTLSKHRFSVLYTNGQLREW
KITIKQSNNVNNSDESDHPTSPPVTTKNIIDVGLNKWLVKFWRTMGEEISRSLGVFHSVN
YIEPNKWLLASNRFLVVLVSHKNIIQTEVLSESEIAVVSIDSRNITPQLAPPLQRKLYGT
NT seq 2343 nt   +upstreamnt  +downstreamnt
atgcaatcaagattgttttgcacaggtgcactgggccgtctcttagagcttgatttacag
acttccagcatcaaggggtcttgtttattagtaggaagcccagtggctcgatgtatgacg
gtcttcgaggataacatagttgtaggcagtgatgaagggtttataacgtttttttcaacc
gacaaaactgatccagctcctaaacttacgattcctaagctctcagggaaaattctgtct
gtggcttgcactcatcaagacgaaggtattctggcaaccggcactagcaccggttctctt
cttctgatatctatccgtgatagtgtttccaaagtaatgtttacgctaacagaatcgaac
aaatcctgtcttatctgggctctactattcgctggtggatttttattttctggagatagt
agaggcgtggtgtgcatttgggatgcatctgtcggcggccagttatatagtttttcttgt
catcatgctgatgtccttgctttggcttccaatcttgatggttccattatttttagtggt
ggagcagatgctattatacggagattcgaattctctgtatccgagaccggagatggtcag
tggcaatgtagtggtgtaattaggggttctagacgtgatattcacgggctagccttcatc
ccaggtcaccatcatgatcctagcgcagaatcttccttctcagatgtccgttttgaacct
catcgtcttcttgctgtgggacaagatgcttgtctactagtaatgtcatgtgaatcaatc
gaaaagggtgttggagtctttgctttggctgaaaagactttggctgtcaatgttggaata
cctcaagatgaacagatagcagataatggatatgttgctgctctcccattttggcctgct
tctgttgccccctctcatccatcaccaggatattttgtaactttgcctatagggtcagta
catggtacttttggaggtcaggcaggtgcatctcgtcatttatgtcttctgcactaccca
gacaaactttgtttagtacgtcttggtcaaccactcacatctggccataagaaggttttc
aagaaatattattctataaatcttgggccacttcaggtgatagaaattcatccatctaag
ggtatggagtttattaaatctagtttatctccttgtggatctttcattgtctacagcgac
ttcaaacgaactcgactgctcaaattagatgtggcatttaagaataaaggaagaagtttc
tgtttgtcaaaagcaaaagtgaaaccagttgaatggagtagtaattcacatgattcaatt
tgtggttctacaaaatctcgtaataagcgagtacgtttggatagttggagtaaatcatct
tcaaatacatcatcttcagagacagaaacagacacagaagaaattctacaagacgctgat
atcctgcaatatttcaccatggataaatcactccagttatcaggtgggaaggatcaacgt
aggttgtctattgaggatttatctgatacagagcagaagaaattaaatgcgataactgtt
ccaccctcatgtttgatggcttttactccgaaatcagaacatctgttattagtgacccaa
aagcgtggaaaatttgtttgtatgtctgtagagaatggcagtattttgtgggatcgtaac
attggcgaagatgatgcgttagatgttcgagcccatataatgtctgtttcaaatattctt
actgattgtggttacttaattggacttggctgttctgatgcacgtgtacgcttatatgat
tccccaactggttctattctgttcacgtgttcctgtattgattcagtcagtggtcattca
cccttaccggtatcaatcgcattcccaaatatcagtgagcaatctgccgaatcaccaata
actacattatccaaacatcgtttctcagtattgtacacaaatggtcagctgagagagtgg
aagataactataaaacagtcaaataatgtaaataattctgacgagtcggatcaccctaca
agtcctccagtcacaacaaaaaatatcattgatgttggactaaacaaatggcttgttaaa
ttttggcgtactatgggtgaggaaatttcacggagtttaggagtatttcatagtgtaaat
tatattgaacccaataaatggctgttagcttcaaatcgattcttagttgttttagtttct
cataaaaacataatccaaacagaagttctatcagaatcagaaatcgcggttgtttcaatt
gattctagaaatataactcctcaactggctccaccattgcagaggaaactgtatgggacg
tga

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