Schistosoma mansoni: Smp_154420.1
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Entry
Smp_154420.1 CDS
T01095
Name
(RefSeq) putative clathrin heavy chain
KO
K04646
clathrin heavy chain
Organism
smm
Schistosoma mansoni
Pathway
smm04142
Lysosome
smm04144
Endocytosis
smm05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
Smp_154420.1
04142 Lysosome
Smp_154420.1
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
Smp_154420.1
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smm04131
]
Smp_154420.1
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smm04147
]
Smp_154420.1
Membrane trafficking [BR:
smm04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
Smp_154420.1
Exosome [BR:
smm04147
]
Exosomal proteins
Proteins found in most exosomes
Smp_154420.1
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_H_link
TPR_PEP5_VPS11
TPR_COPA_B
ANAPC3
HEAT_Nup120
TPR_1
TPR_Vps41
capSnatchArena
PSD2
Motif
Other DBs
NCBI-GeneID:
8340533
NCBI-ProteinID:
XP_018648355
LinkDB
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Position
1:27052327..27073767
Genome browser
AA seq
1334 aa
AA seq
DB search
MASRCNLPGAEDLFFKKFDSLFQSGQFPEAAKLAANAPKGILRTPQTIQRFQQVSSAPGQ
ASALLQYFGILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKQA
DPTLALSVYLRANVPPKVVQCFAETGQFQKIIVYAKKVGYTPDYIFLLRNLTRINPDQGL
QFAQMLVQDQEPLVDLEQVVNVFMDQGLVQQCTSFLLDALKHNRPSEGHLQTRLLEMNLM
SAPQVADAILGNQMFSHYDRAAIAQLCEKAGLLQRALEHYTDLYDIKRAVVSTHLLNPEW
LVNYFGSLSVDDSLECLRAMLQTNIRQNLQVCVQIATKYHEQLGTNALIEIFESFKSFEG
LFYFLGSIVNFSQEPEVHFKYIQAACKTGQVKEVERICRESNCYEPERVKNFLKEAKLTD
QLPLIIVCDRFDFVHDLVLYLFRNNLQKYIEIYVQKVNPARLPVVVGGLLDVDCSEDIIK
QLMAVVRGQFNTDELVAEVEKRNRLKLLLPWLESRVHEGSVEPATHNALAKIYIDLNNNP
ERFLRENQYYNSSVVGKYCEKRDPHLACIAYERGHCDQDLIRVCNENALFKTEARYLVRR
KEPELWAEALSESNSYRRQLIDQVVQTALSETQDPEEISVSVKAFMAADMPNELIELLEK
IVLDNSVFSDHRNLQNLLILTAIKADKSRVMEYINRLDNYDAPDVANIAINNSLFEEAFA
IFKKFEVNTSAIQVLIDHVKNFDRAYEFAERCNEPAVWSLLAHAQLAQGSIKEAIDSYVK
ASDPSRFQAVSEAASNSGNWEDLVRYLQMARKKARETFIESELAFAYARTNRLSDLEEFI
SGPNHANITVVADRCFDQQLYEAAKILYSNVSNYSRLAITLVHLGEYQGSVDAARKANST
RTWKEVCFACVNHKEFRLAQMCGLHIVVHADELGDLINYYEQRGHFDELIQLLEAGLGLE
RAHMGMFTELAILYSKFKPEKMREHLELFWSRVNIPKVLRAAEQAHLWSELVFLYDKYEE
YDNAILTMMSHPTEGWRENHFKDLITRVANVELYYKAIQFYLTYKPLLLNDLLMVLSPRL
DHTRAVNFFIKAGHIALVKPYLRFVQQNNANNKSVNEALNDLLIEEEDYQALRQSIETHS
NFDHIALAQQLERHELIEFRRLAALLFKGSNRWMQSIDLCKRDQLYSDAMQYAWDSRDPE
TAEELLRWFLSENLPDCFAACLYRCYDLLRPDVVLELAWRNGLIDMAMPFLIQTLRELTT
KVDRLERSEQTRAAEEEKAEQAVNPLVMRTEPQLMLPGPAGSMPAALIPPTGAPIGMFGV
TGPQMYYQTNGPSF
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagatgcaatcttcctggtgcagaagatttgtttttcaagaaattcgattct
ctttttcaatccggtcagtttcccgaagctgcgaagttagcagctaatgctcctaaaggt
attttgcgcactccacagacaattcaacgttttcaacaggtgtcaagtgcaccagggcaa
gcatcagccctgttgcagtattttggaattctacttgaccaaggtcaacttaacaagttc
gaaagtctggagctttgtagaccagttttacaacagggtaggaaacagttgttggaaaaa
tggttgaaggaggacaaattagaatgttcagaggagttaggagatcttgttaagcaggcg
gatcctacactagctttgtcagtctacctaagggccaatgttccaccaaaggtcgtacag
tgttttgctgaaactggccagtttcagaaaatcatcgtttatgcgaagaaggtcggctac
acaccagattatatttttctgttacgcaacctaactcgtatcaacccagaccaaggtttg
cagtttgcccaaatgttggttcaggatcaagaacctttagttgatttagaacaagttgta
aatgtgtttatggatcaaggtttggtgcagcaatgtacatcattcttactggatgcatta
aagcataatcgaccttctgagggacatctccaaactcgtttattagaaatgaatctaatg
tcagcacctcaggttgcggatgcaattttgggcaaccaaatgttttcacattatgatcgg
gcagctattgctcagttgtgtgagaaagcagggttgttgcagcgggctttggagcactat
actgatctttacgacatcaaacgggctgtcgtaagtacacatttgttaaatcctgagtgg
cttgtcaattattttggctcactttctgtcgatgactcgttggagtgtttgagagctatg
ctgcagacaaatattagacaaaatctccaggtctgtgtccagattgctactaagtatcac
gaacagttggggacgaatgcgcttatcgaaatttttgaatccttcaaatcatttgaaggc
ctgttttactttttggggtctattgttaattttagtcaagaacctgaagttcattttaaa
tatattcaagctgcctgtaaaaccggacaagtcaaagaagttgaacggatttgtcgcgaa
agcaattgttatgaaccagaacgagttaaaaattttcttaaagaggcaaaacttacggac
caattacctcttattattgtctgcgatcgcttcgattttgttcatgatctcgtcctttat
ttgtttcgtaataatttgcagaaatacattgagatttatgtgcaaaaagttaatccagcc
cgtttaccggtagtcgttggaggccttttagatgttgattgttcagaggacataataaag
cagttgatggcagttgttcgtggtcagttcaatactgatgaacttgttgcagaagtggaa
aagcgcaatcggctgaagttattactgccatggcttgaatcacgtgtacatgaaggatct
gttgaacctgctacacataatgccctagcaaagatttacatagaccttaacaacaatcct
gaacgtttcttgagagaaaatcagtattataatagctctgttgtcggtaaatactgtgaa
aagcgtgatccacatttagcgtgtattgcatatgaacgtgggcattgtgaccaagatcta
atcagagtttgtaatgaaaacgcattattcaaaactgaagctcgttacttagttagacgg
aaagaaccggagctatgggcagaagctttaagtgaatctaatagttaccgtcgacaatta
attgatcaagttgttcagacagcactttctgagacccaagatcctgaagagatatccgtt
tctgttaaagcatttatggctgcggatatgccgaatgaacttattgaacttctggagaaa
atagttctggacaactcagtattttctgatcatcgcaaccttcaaaaccttttaatccta
actgcaattaaggctgataaaagtcgtgtcatggaatacattaatcgtttggataattat
gatgctcctgatgttgctaacatagccataaataattctctttttgaagaagcatttgcc
attttcaagaaatttgaagtcaacacatccgctatacaggttttgattgaccatgtcaaa
aattttgatagggcctatgaatttgctgaacgttgtaatgagccagctgtttggagtctt
ctagcacatgctcagttagctcaaggttccataaaagaagccatcgactcatacgtgaag
gcgtctgatcctagtcgattccaagcggtctccgaagctgcttcaaactctggaaattgg
gaagatttagttcgttatctccaaatggcacgaaagaaagcccgtgagacgtttattgag
tcagagcttgccttcgcctatgcaaggactaatcgtttgtcagatctcgaagagttcatt
tcagggccaaatcatgccaatataactgttgtagccgatcgttgttttgaccaacagcta
tacgaggcagctaagatattatattcaaacgttagcaactattcccgcctagcaataact
ttggttcacttaggtgagtatcaaggatctgtggatgctgctcgaaaagcaaattcaaca
cgcacttggaaagaagtatgtttcgcttgtgtaaatcacaaggaatttcgtttggctcaa
atgtgcggtctacatattgttgtacatgcagatgaattaggcgatcttattaattactat
gaacaacgcggtcactttgatgaacttattcaacttttagaagctggtttaggtttggaa
cgggcacatatgggaatgttcactgagctggcaatattgtattcaaagtttaagccggag
aaaatgcgggaacatttggagcttttctggtctcgtgtcaatattccaaaggttcttcgt
gctgctgaacaagctcatttatggtcagagttagtatttctttatgataagtatgaagag
tatgataatgcgattcttacaatgatgagtcatccaactgaaggatggagagagaatcat
ttcaaagacttaataacacgggttgctaacgtagaattatattataaagctatccaattc
tacttgacttacaaaccgctgcttctaaatgacttactcatggtcttatcacctcgtttg
gatcatacacgtgcagtaaatttcttcatcaaggcaggacatattgctctagttaaaccc
tatttgcggttcgttcaacaaaataatgcaaataataaatcagtgaatgaggctttaaac
gacttgttaatcgaagaagaagattatcaagctttaaggcaatctattgaaactcatagt
aactttgatcatattgcgttggctcaacagttagagcgtcatgaactcattgagtttcgt
cgccttgccgctttattgtttaaaggtagtaatcggtggatgcaaagtatcgacctttgt
aaacgtgatcagttgtattctgacgccatgcaatatgcctgggattctcgggatcctgag
acagctgaggaattgcttcgttggttcctttccgaaaatctacccgactgtttcgcagct
tgtctttaccgttgttacgatctcctgcgtccagatgttgtcttggaacttgcttggcgc
aatggacttattgacatggctatgccattcttaattcaaactttgagagagttaacaaca
aaagtggatcgtctagaacgctctgaacaaactcgtgctgctgaagaggagaaagctgaa
caggcagttaatccgctagtgatgcgaactgaacctcagttaatgttaccgggaccagca
ggatctatgccagcagccttaatcccaccaacgggcgcaccgattggaatgttcggagtt
actggcccacaaatgtattatcaaacaaacggaccatctttttaa
DBGET
integrated database retrieval system